HHSEARCH alignment of GI: 254781016 and SCOP domain: d1h72c1

Alignment
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.35  E-value=3.9e-12  Score=102.07  Aligned_cols=137  Identities=16%  Similarity=0.135  Sum_probs=99.2

Q ss_pred             CEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             37897488424881167767011757898434681278107999971788857998787256652068999999742167
Q gi|254781016|r   23 KSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQ  102 (355)
Q Consensus        23 ~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~  102 (355)
                      |.+.++|.-+|=+           =|=-++|.+.|+.++.+.+++..+..+..+..+++..+..+.. .-+.+..+.+.+
T Consensus         2 ~i~v~~Pas~aNl-----------g~GFD~lg~Al~~~~d~v~v~~~~~~~i~i~~~~~~i~~~~~~-n~~~~~~~~~~~   69 (163)
T d1h72c1           2 KVRVKAPCTSANL-----------GVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDK-NVAGIVAKKMID   69 (163)
T ss_dssp             EEEEEEEEEEECT-----------GGGTTTEEEEEEEEEEEEEEEEESSSSEEEEESCTTSCCCTTT-SHHHHHHHHHHH
T ss_pred             EEEEEEECCHHHC-----------CCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHH-HHHHHHHHHHHH
T ss_conf             7999983307755-----------5467676512247865899999789828997448525775442-247899888998


Q ss_pred             HC--CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC------CC--C-CHHHHCCCCHHC
Q ss_conf             61--9439999850233211012322479999999999818899988999886521------35--3-034310562002
Q gi|254781016|r  103 FS--KVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLG------SG--S-ACRSFYRGFCEW  171 (355)
Q Consensus       103 ~~--~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlG------SG--S-A~RSi~GG~v~W  171 (355)
                      ..  ...++|...+++|.++||+||||..+|+..|++++++++++.+++..+|+++      +|  + .+-++|||++.-
T Consensus        70 ~~~~~~~~~i~i~~~IP~gaGLGsSSA~a~a~l~aln~l~~~~ls~~~l~~~A~~~e~~~~g~~~gddv~~~~~GG~~~~  149 (163)
T d1h72c1          70 DFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMV  149 (163)
T ss_dssp             HTTCCCEEEEEEECSSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHSSCCCTTHHHHHHCSEEEE
T ss_pred             HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEE
T ss_conf             62998778999960641356657507889999999999837998979999999998776537877147678760997999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Homoserine kinase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]