HHSEARCH alignment of GI: 254781016 and SCOP domain: d1h72c2

Alignment
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.50  E-value=0.0061  Score=37.74  Aligned_cols=115  Identities=9%  Similarity=0.049  Sum_probs=71.4

Q ss_pred             CCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             42158999728766752105679887618568999973055099999999809999999999999998999870389956
Q gi|254781016|r  193 DLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPL  272 (355)
Q Consensus       193 dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~  272 (355)
                      ++++++++.+.+-    ||.-+........-++..+. .-.+...+..++..+|++.+++.+++|  .+|.-.....   
T Consensus         2 ~l~~vl~~P~~~v----sT~~aR~~LP~~~~~~dav~-n~~~~~~lv~al~~~d~~l~~~~~~~D--~l~Ep~r~~l---   71 (133)
T d1h72c2           2 KLDILIAIPNISI----NTKEAREILPKAVGLKDLVN-NVGKACGMVYALYNKDKSLFGRYMMSD--KVIEPVRGKL---   71 (133)
T ss_dssp             CCCEEEECCSSCC----CHHHHHHTSCSCCCHHHHHH-HHHHHHHHHHHHHTTCHHHHHHHHTTC--CSSHHHHHTT---
T ss_pred             EEEEEEEECCCCC----CHHHHHHHCHHHCCHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHCC--CCCCCEECCC---
T ss_conf             6699999899988----58999986654397999987-042148899987406788999998468--4447100104---


Q ss_pred             EEECHHHHHHHHHHHHHHHCCCEEEEEE-CCCCEEEEEECHHHHHHHHHHHHHC
Q ss_conf             8657889999999999742896199997-7798179995589899999997632
Q gi|254781016|r  273 LYWQKETIQGMERVWDARQQSIPIYFTL-DAGPNLKLLFTHKIEETIKQFFPEI  325 (355)
Q Consensus       273 ~Y~~~~t~~ii~~v~~~R~~g~~v~fT~-DAGPNv~il~~~~~~~~i~~~l~~i  325 (355)
                         -|+..++.+.   ++. | ..+++| .+||.|..||..++.+.+.+.+.+.
T Consensus        72 ---~P~~~~ik~~---l~~-g-a~~~~lSGSGPTv~al~~~~~~~~~~~~l~~~  117 (133)
T d1h72c2          72 ---IPNYFKIKEE---VKD-K-VYGITISGSGPSIIAFPKEEFIDEVENILRDY  117 (133)
T ss_dssp             ---STTHHHHHHH---HTT-T-EEEEEECTTSSCEEEEECGGGHHHHHHHHHHH
T ss_pred             ---CCCHHHHHHH---HHC-C-CEEEEEECCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             ---9736999998---535-8-66999967997079983737899999999998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Homoserine kinase
domain: Homoserine kinase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]