PSIBLAST alignment of GI: 254781016 and protein with PDB id: 3d4j
gi|218681762|pdb|3D4J|A Chain A, Crystal Structure Of Human Mevalonate Diphosphate Decarboxylase Length = 400
>gi|218681763|pdb|3D4J|B Chain B, Crystal Structure Of Human Mevalonate Diphosphate Decarboxylase Length = 400
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 104/355 (29%), Positives = 157/355 (44%), Gaps = 28/355 (7%)
Query: 16 CNPKINEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSL--GHLGTITHITVI-DSD 72
+ K + P NIA+ KYWGKRD +L LP+N+SLS++L L T T + D
Sbjct: 2 ASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFT 61
Query: 73 ADCIILNGQKISSQSSFFKKTTQFCDL-------------FRQFSKVYFLIETSNNIPTK 119
D I LNG++ + + + + NN PT
Sbjct: 62 EDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTA 121
Query: 120 AGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNG 179
AGLASSA+G+A L L R+Y + LS VAR GSGSACRS Y GF EW G +G
Sbjct: 122 AGLASSAAGYACLAYTLARVYGVE---SDLSEVARRGSGSACRSLYGGFVEWQMGEQADG 178
Query: 180 MDSFA--VPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQ-QISTDLA 236
DS A V + WP+LR+ +L + +K GS M + SP + + +A
Sbjct: 179 KDSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMA 238
Query: 237 HIKQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDAR--QQSI 294
+ + I ++DF ++ K++ + HAT + PP+ Y + + + V
Sbjct: 239 EMARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDT 298
Query: 295 PIYFTLDAGPNLKLLFTHKIEETIKQFFPEITIIDPLDSP-DLWSTKDSLSQKNS 348
+ +T DAGPN + +T+ +F + P S D + +
Sbjct: 299 KVAYTFDAGPNAVIFTLD---DTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPL 350