RPSBLAST alignment of GI: 254781016 and protein with PDBid: 3lto
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} Length = 323
Score = 254 bits (650), Expect = 2e-68
Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 25/316 (7%)
Query: 23 KSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSD---ADCIILN 79
A P+NIAL KY GK+D NLP N+SLS +L +L + + + + + + +
Sbjct: 2 HWFAQAPANIALIKYMGKKDENSNLPDNSSLSYTLSNLLSSVKLEKLPTKKDIWEPLTIP 61
Query: 80 GQKISSQSSFFKKTTQFCDLFRQFSK-----VYFLIETSNNIPTKAGLASSASGFAALTL 134
G + + +F D + + FLI++SNN P +GLASSAS FAALT
Sbjct: 62 GAP--EFNLSVEAQKRFIDHLVRLKEYFGYVGGFLIQSSNNFPHSSGLASSASSFAALTK 119
Query: 135 ALFRIYSIPEKS-----ESLSRVARLGSGSACRSFYRGFCEWICGTDQNGMDSFAVPFNN 189
S + + ++++RLGSGS+CRSFY + W G A+
Sbjct: 120 CASIALSELTQKPLPSIDEQAQLSRLGSGSSCRSFYAPWALW------TGDKVSAIDL-- 171
Query: 190 QWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIK 249
+ DL ++ I +EK+I SR A ++ + SPF+ +++ +L + A ++D+
Sbjct: 172 PYKDLLHQVIVISSQEKEIPSRVAHKLVKT-SPFYETRSERAEANLKLLLNAFENKDWTS 230
Query: 250 LGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQS-IPIYFTLDAGPNLKL 308
+ ++ L MH P Y T+ + + + T+DAGPN+ L
Sbjct: 231 IYQICWHEFLDMHQLFKTCEKPFSYITDNTLHILSVIEKFWNEKGDGPVVTMDAGPNVHL 290
Query: 309 LFTHKIEETIKQFFPE 324
L+ + +QF +
Sbjct: 291 LYRSDQTDLARQFKSD 306