HHsearch alignment for GI: 254781017 and conserved domain: COG1577
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism].
Probab=100.00 E-value=0 Score=416.28 Aligned_cols=298 Identities=31% Similarity=0.444 Sum_probs=255.8
Q ss_pred EEEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHCC--
Q ss_conf 999717049997435330894289877677289999986898499995364444656612015089999999997187--
Q gi|254781017|r 8 ICVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAINHIKP-- 85 (324)
Q Consensus 8 i~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~-- 85 (324)
T Consensus 1 ~~~~aPgKliL~GEHAVVyG~pAI~~aI~~~~~v~~~~s~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~v~~~~e~~~~~ 79 (307)
T COG1577 1 ISVSAPGKLILFGEHAVVYGYPAIAAAIDLRVTVTISESDSNKIVIESSDLKSS-TLERDEDEGYIQAAVRLASELLNQS 79 (307)
T ss_pred CCCCCCCCEEEEECCEEEECCCHHHEEEEEEEEEEEEECCCCCEEEECCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 932235308998113455187315135010089999966888579841677765-5456663248999999999873325
Q ss_pred -CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEE
Q ss_conf -7873899982687535488740245665567776404566660145578888776521468875447766298589985
Q gi|254781017|r 86 -SCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLICYQM 164 (324)
Q Consensus 86 -~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i~~~~ 164 (324)
T Consensus 80 ~~~~~~l~I~S~iP~g~GLGSSAAVsva~i~al~~~-~g~~ls~~~l~~la~~~e~~vqG~~Sg~D~a~~~~gg~v~~~~ 158 (307)
T COG1577 80 SLKPFSLEIDSEIPIGAGLGSSAAVSVAVIKALSAY-FGVELSPEELAKLANKVELIVQGKASGIDIATITYGGLVAFKK 158 (307)
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEC
T ss_conf 789847999627998878627999999999999986-2898898999999999999875898761403886188899845
Q ss_pred C-CCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 2-751567304777526765841798999988899886082348999999984033207889873048644568999998
Q gi|254781017|r 165 P-KYSIEKIDFIFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQ 243 (324)
Q Consensus 165 ~-~~~~~~~~~~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~ 243 (324)
T Consensus 159 ~~~~~~l~~~~~~~~~I~~tg~~~sT~e~V~~V~~l~~~~~---~~~~~~~~~ig~~~~~a~~al~~~d~e~lgelm~~n 235 (307)
T COG1577 159 GFDFEKLEIELLGTLVIGDTGVPGSTKELVAGVAKLLEEEP---EVIDPILDAIGELVQEAEAALQTGDFEELGELMNIN 235 (307)
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 88752013566771899974886608999999999998646---778999999999999999998616499999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 99998616787799999999997199459972689975489998466532689999999999779789994
Q gi|254781017|r 244 QGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDIVPI 314 (324)
Q Consensus 244 ~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 314 (324)
T Consensus 236 q~LL~~LgVs~~~L~~lv~~a~~-~Ga~gaKlTGAGgGGc~IaL~~~~~~---~~~l~~~~~~~~i~~~~~ 302 (307)
T COG1577 236 QGLLKALGVSTPELDELVEAARS-LGALGAKLTGAGGGGCIIALAKNEEI---AETLSNRLEKAGIALLWI 302 (307)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHH-CCCCCCCCCCCCCCCEEEEEECCCHH---HHHHHHHHHHCCCCHHCC
T ss_conf 98898658486899999999986-69510021468888669998355158---999998888658630000