HHsearch alignment for GI: 254781017 and conserved domain: COG1829
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only].
Probab=99.38 E-value=2.1e-09 Score=78.74 Aligned_cols=239 Identities=18% Similarity=0.220 Sum_probs=147.6
Q ss_pred EEEECCEEEEEE-----CCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHH
Q ss_conf 999717049997-----435330894289877677289999986898499995364444656612015089999999997
Q gi|254781017|r 8 ICVSAPGSLVLM-----GEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAINH 82 (324)
Q Consensus 8 i~~~aPGKv~L~-----GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 82 (324)
T Consensus 3 ~~~fvP~hITgfF~pv~~~~p~~SGSiGaGv~l~~gv~v~v~~~~~~~v~~Ng--~----~~----d~---~~~~~v~e~ 69 (283)
T COG1829 3 VRLFVPGHITGFFVPVIGKDPLKSGSIGAGVALERGVTVEVRFGEGTGVRLNG--K----KI----DL---PITRKVIEK 69 (283)
T ss_pred CEEECCCEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEECC--E----EC----CC---HHHHHHHHH
T ss_conf 14852642689888524899766788642379638626999965873588899--6----31----30---269999998
Q ss_pred HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHCCCEEE
Q ss_conf 187787389998268753548874024566556777640456666014557888877652146887-5447766298589
Q gi|254781017|r 83 IKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSG-IDLAASIHGGLIC 161 (324)
Q Consensus 83 ~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG-~D~~a~~~Gg~i~ 161 (324)
T Consensus 70 L~~~-~~~v~~~~~~P~G~G~G~Sga~AL~~Ala~a~~---~~~~~~~a~~~AH~aEV~~---gtGLGDVvAq~~GGlVi 142 (283)
T COG1829 70 LGPD-GVGVRIESPVPLGCGYGVSGAGALGTALALAEE---LGLGEESAARIAHVAEVEN---GTGLGDVVAQYTGGLVI 142 (283)
T ss_pred HCCC-CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHC---CCCCHHHHHHHCCCEEE
T ss_conf 4766-862699851798865414479999999998866---4998789999888999871---78704788875085799
Q ss_pred EEECCC----EEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH-HHHHCCCCHHHH
Q ss_conf 985275----156730477752676584179899998889988608234899999998403320788-987304864456
Q gi|254781017|r 162 YQMPKY----SIEKIDFIFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQIS-CQALRNKNLKVL 236 (324)
Q Consensus 162 ~~~~~~----~~~~~~~~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~al~~~d~~~l 236 (324)
T Consensus 143 R~~pG~Pg~~~vd~Ip~~~~~V~~~~~g~l~T~~vi~~~~------------~~~i~----~~g~~~l~ellk~Ptle~- 205 (283)
T COG1829 143 RVKPGGPGEGEVDRIPVPGLRVITISLGELSTKSVITDEV------------VRKIN----EAGKRALAELLKNPTLEN- 205 (283)
T ss_pred EECCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHH------------HHHHH----HHHHHHHHHHHHCCCHHH-
T ss_conf 8318999857898860488269999736666777630678------------99999----999999999883999999-
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEE
Q ss_conf 8999998999986167877999999999971994599726899754899984
Q gi|254781017|r 237 AQAMNRQQGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALG 288 (324)
Q Consensus 237 ~~lm~~~~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~ 288 (324)
T Consensus 206 --f~~~a~~FA~~~Gl~~~~v~~~~~~~~~-~g~l~as~--~mlg~tVFa~~ 252 (283)
T COG1829 206 --FMEEAREFARRTGLMSEEVKEAAEALHS-VGGLGASM--AMLGVTVFALS 252 (283)
T ss_pred --HHHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCHHHHH--HHHCCEEEEEC
T ss_conf --9999999998728678899999987543-47445767--86386899962