HHsearch alignment for GI: 254781017 and conserved domain: COG3890
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism].
Probab=99.97 E-value=1.2e-28 Score=200.55 Aligned_cols=302 Identities=22% Similarity=0.273 Sum_probs=200.4
Q ss_pred CCEEEEECCEEEEEECCCEEEC-CCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHH-CCCHHHHHHHHHHH
Q ss_conf 8789997170499974353308-942898776772899999868984999953644446566120-15089999999997
Q gi|254781017|r 5 LHKICVSAPGSLVLMGEHGVLH-GHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAM-FHPSFSFIIMAINH 82 (324)
Q Consensus 5 ~~ki~~~aPGKv~L~GEh~v~~-G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~ 82 (324)
T Consensus 1 M~~~~fSaPGk~LlaGdYs~lv~glsahaia~nkr~~cs~vrvKskdswlfhisi---~g~~knsfiEl~~~~Vf~yF~~ 77 (337)
T COG3890 1 MDLISFSAPGKLLLAGDYSILVEGLSAHAIAINKRAFCSFVRVKSKDSWLFHISI---KGIDKNSFIELRSDFVFKYFAY 77 (337)
T ss_pred CCEEEECCCCCEEEECCCEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEEEEE---CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9524405887369840311355233124787305552013674267458987330---1368871899999999999875
Q ss_pred HCCCCCEEEEEECC---------C---CCCCCCCCCCHHHHHHH-HHHHHHHCCCCCCC-HHHHHHHHHHHHHHCC-CCC
Q ss_conf 18778738999826---------8---75354887402456655-67776404566660-1455788887765214-688
Q gi|254781017|r 83 IKPSCGFDLKVISQ---------L---DSQLGLGSSAAITVAIT-AALLTLQYHKEPSP-DEILTTAHAIVLKVQG-ISS 147 (324)
Q Consensus 83 ~~~~~g~~i~i~s~---------i---P~g~GLGSSaa~~va~~-~al~~~~~~~~~~~-~~i~~lA~~~E~~~~g-~~s 147 (324)
T Consensus 78 ~~~~c~qnlev~~ddayy~q~~f~~d~g~KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggIGS 157 (337)
T COG3890 78 LSQNCFQNLEVFADDAYYDQSNFFFDDGTKTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGIGS 157 (337)
T ss_pred HHHHCCCCCEEECCHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 41422333223232321056322214776577762468899999999998860565016789999999988997179776
Q ss_pred CHHHHHHHCCCEEEEEECCCEEEEE------EC-CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
Q ss_conf 7544776629858998527515673------04-7775267658417989999888998860823489999999840332
Q gi|254781017|r 148 GIDLAASIHGGLICYQMPKYSIEKI------DF-IFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKL 220 (324)
Q Consensus 148 G~D~~a~~~Gg~i~~~~~~~~~~~~------~~-~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i 220 (324)
T Consensus 158 GfDiaaA~fGsiiyrRF~p~li~~l~qig~~nfg~y~LmmGd~a~gSeTvglV~kv~~w~ns~~--peelk-c~d---e~ 231 (337)
T COG3890 158 GFDIAAAIFGSIIYRRFEPGLIPKLRQIGAVNFGDYYLMMGDQAIGSETVGLVCKVNKWRNSIL--PEELK-CND---EM 231 (337)
T ss_pred CCHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC--HHHHH-HHH---HH
T ss_conf 4035676623157863483100345763750306765662232368553489999987763378--58877-678---88
Q ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----C-CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCH
Q ss_conf 078898730486445689999989999861-----6-7877999999999971994599726899754899984665326
Q gi|254781017|r 221 SQISCQALRNKNLKVLAQAMNRQQGLLETL-----G-VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNS 294 (324)
Q Consensus 221 ~~~~~~al~~~d~~~l~~lm~~~~~~L~~l-----g-vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~ 294 (324)
T Consensus 232 nsrvl~l~~~-sLdE~~s~~~~irrslrritee~~adiep~kqt~~Ld~i~~l~gvl~~lipgaGggdaif~l~~~~~-- 308 (337)
T COG3890 232 NSRVLNLIKL-SLDESNSKSKAIRRSLRRITEEGLADIEPIKQTAALDSIFDLLGVLCDLIPGAGGGDAIFLLYRPNI-- 308 (337)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCH--
T ss_conf 8999988862-0888999999999999999997523333411355400677602754750246788753799845628--
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf 8999999999977978999414545644
Q gi|254781017|r 295 LPYQSVNCHMHAKGIDIVPITPSHSTSL 322 (324)
Q Consensus 295 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 322 (324)
T Consensus 309 ----e~re~w~~~gi~i~dv~adeGlr~ 332 (337)
T COG3890 309 ----EAREAWLSKGISIVDVNADEGLRF 332 (337)
T ss_pred ----HHHHHHHHCCEEEEECCCCCCCCC
T ss_conf ----988878757807997144436112