HHsearch alignment for GI: 254781017 and conserved domain: COG3890

>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism].
Probab=99.97  E-value=1.2e-28  Score=200.55  Aligned_cols=302  Identities=22%  Similarity=0.273  Sum_probs=200.4

Q ss_pred             CCEEEEECCEEEEEECCCEEEC-CCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHH-CCCHHHHHHHHHHH
Q ss_conf             8789997170499974353308-942898776772899999868984999953644446566120-15089999999997
Q gi|254781017|r    5 LHKICVSAPGSLVLMGEHGVLH-GHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAM-FHPSFSFIIMAINH   82 (324)
Q Consensus         5 ~~ki~~~aPGKv~L~GEh~v~~-G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~   82 (324)
T Consensus         1 M~~~~fSaPGk~LlaGdYs~lv~glsahaia~nkr~~cs~vrvKskdswlfhisi---~g~~knsfiEl~~~~Vf~yF~~   77 (337)
T COG3890           1 MDLISFSAPGKLLLAGDYSILVEGLSAHAIAINKRAFCSFVRVKSKDSWLFHISI---KGIDKNSFIELRSDFVFKYFAY   77 (337)
T ss_pred             CCEEEECCCCCEEEECCCEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEEEEE---CCCCCCHHHHHHHHHHHHHHHH
T ss_conf             9524405887369840311355233124787305552013674267458987330---1368871899999999999875


Q ss_pred             HCCCCCEEEEEECC---------C---CCCCCCCCCCHHHHHHH-HHHHHHHCCCCCCC-HHHHHHHHHHHHHHCC-CCC
Q ss_conf             18778738999826---------8---75354887402456655-67776404566660-1455788887765214-688
Q gi|254781017|r   83 IKPSCGFDLKVISQ---------L---DSQLGLGSSAAITVAIT-AALLTLQYHKEPSP-DEILTTAHAIVLKVQG-ISS  147 (324)
Q Consensus        83 ~~~~~g~~i~i~s~---------i---P~g~GLGSSaa~~va~~-~al~~~~~~~~~~~-~~i~~lA~~~E~~~~g-~~s  147 (324)
T Consensus        78 ~~~~c~qnlev~~ddayy~q~~f~~d~g~KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggIGS  157 (337)
T COG3890          78 LSQNCFQNLEVFADDAYYDQSNFFFDDGTKTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGIGS  157 (337)
T ss_pred             HHHHCCCCCEEECCHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             41422333223232321056322214776577762468899999999998860565016789999999988997179776


Q ss_pred             CHHHHHHHCCCEEEEEECCCEEEEE------EC-CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
Q ss_conf             7544776629858998527515673------04-7775267658417989999888998860823489999999840332
Q gi|254781017|r  148 GIDLAASIHGGLICYQMPKYSIEKI------DF-IFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKL  220 (324)
Q Consensus       148 G~D~~a~~~Gg~i~~~~~~~~~~~~------~~-~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i  220 (324)
T Consensus       158 GfDiaaA~fGsiiyrRF~p~li~~l~qig~~nfg~y~LmmGd~a~gSeTvglV~kv~~w~ns~~--peelk-c~d---e~  231 (337)
T COG3890         158 GFDIAAAIFGSIIYRRFEPGLIPKLRQIGAVNFGDYYLMMGDQAIGSETVGLVCKVNKWRNSIL--PEELK-CND---EM  231 (337)
T ss_pred             CCHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC--HHHHH-HHH---HH
T ss_conf             4035676623157863483100345763750306765662232368553489999987763378--58877-678---88


Q ss_pred             CHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----C-CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCH
Q ss_conf             078898730486445689999989999861-----6-7877999999999971994599726899754899984665326
Q gi|254781017|r  221 SQISCQALRNKNLKVLAQAMNRQQGLLETL-----G-VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNS  294 (324)
Q Consensus       221 ~~~~~~al~~~d~~~l~~lm~~~~~~L~~l-----g-vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~  294 (324)
T Consensus       232 nsrvl~l~~~-sLdE~~s~~~~irrslrritee~~adiep~kqt~~Ld~i~~l~gvl~~lipgaGggdaif~l~~~~~--  308 (337)
T COG3890         232 NSRVLNLIKL-SLDESNSKSKAIRRSLRRITEEGLADIEPIKQTAALDSIFDLLGVLCDLIPGAGGGDAIFLLYRPNI--  308 (337)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCH--
T ss_conf             8999988862-0888999999999999999997523333411355400677602754750246788753799845628--


Q ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             8999999999977978999414545644
Q gi|254781017|r  295 LPYQSVNCHMHAKGIDIVPITPSHSTSL  322 (324)
Q Consensus       295 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~  322 (324)
T Consensus       309 ----e~re~w~~~gi~i~dv~adeGlr~  332 (337)
T COG3890         309 ----EAREAWLSKGISIVDVNADEGLRF  332 (337)
T ss_pred             ----HHHHHHHHCCEEEEECCCCCCCCC
T ss_conf             ----988878757807997144436112