HHsearch alignment for GI: 254781017 and conserved domain: PRK01212
>PRK01212 homoserine kinase; Provisional.
Probab=99.97 E-value=2.5e-28 Score=198.39 Aligned_cols=284 Identities=18% Similarity=0.178 Sum_probs=201.1
Q ss_pred CCEEEEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHC
Q ss_conf 87899971704999743533089428987767728999998689849999536444465661201508999999999718
Q gi|254781017|r 5 LHKICVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAINHIK 84 (324)
Q Consensus 5 ~~ki~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 84 (324)
T Consensus 1 ~~~v~v~vPAtsANlG~-----GFD~lg~Al~l~d~v~v~~~~-~~~~~~g~~---~~~lP~d~~Nlv~~a~~~~~~~~g 71 (293)
T PRK01212 1 MMMVKVYVPASSANLGP-----GFDSLGLALSLYDEVTVEEAD-FSLEVEGEF---ADKLPLDEENLVYQAALKFLEKLG 71 (293)
T ss_pred CEEEEEEECCCHHHCCC-----CHHHHHCCCCCCCEEEEEECC-CEEEEEECC---CCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 90799993243663573-----746665456777599999868-789998168---666999998179999999999839
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH-HHHCCCEEEEE
Q ss_conf 77873899982687535488740245665567776404566660145578888776521468875447-76629858998
Q gi|254781017|r 85 PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLA-ASIHGGLICYQ 163 (324)
Q Consensus 85 ~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~-a~~~Gg~i~~~ 163 (324)
T Consensus 72 ~~~g~~I~i~k~IP~~~GLGsssa~aaa~l~a~n~l-~~~~ls~~eL~~lA~~~e----~H~---DNv~P~~~GG~~~~~ 143 (293)
T PRK01212 72 KPPGLRLELEKNIPLGRGLGSSAASIVAALVAANEL-LGLPLSKEELLQLAGEGE----GHP---DNVAPALLGGLVLAL 143 (293)
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHC----CCC---CCCCCEEECCEEEEE
T ss_conf 998879999718986566575188999999999998-179989899999999842----676---655774526778996
Q ss_pred -ECCCEEEEEECC--CCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
Q ss_conf -527515673047--77526765841798999988899886082348999999984033207889873048644568999
Q gi|254781017|r 164 -MPKYSIEKIDFI--FPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAM 240 (324)
Q Consensus 164 -~~~~~~~~~~~~--~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm 240 (324)
T Consensus 144 ~~~~~~~~~~~~~~~~~~vl~~P~~~vsT~~aR~~L---p~~~~~-~dav~----~~~-~~~~l~~al~~~d~~~l~~~~ 214 (293)
T PRK01212 144 EENGVISVKIPVFDDWKWVVAIPGIELSTAEARAVL---PKQYSR-KDAVF----NSS-RLALLVAALYTGDYELAGAAM 214 (293)
T ss_pred CCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHC---CCCCCH-HHHHH----HHH-HHHHHHHHHHCCCHHHHHHHH
T ss_conf 279648997478876489999489674489999856---032887-89886----553-437889999839999999874
Q ss_pred HHH-HHHHH-HHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 998-99998-6167877999999999971994599726899754899984665326-89999999999779789994145
Q gi|254781017|r 241 NRQ-QGLLE-TLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNS-LPYQSVNCHMHAKGIDIVPITPS 317 (324)
Q Consensus 241 ~~~-~~~L~-~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~ 317 (324)
T Consensus 215 ~D~lhep~r~~l---iP~~~~i~~~~~-~~GA~~~~lSGSGp--tv~al~~~~~~A~~i~~~l~~~~~~~~~-v~~l~~d 287 (293)
T PRK01212 215 KDVLHEPYRAKL---IPGFAEVRQAAL-EAGALGAGISGAGP--TVFALCDKEDAAEAVADALEKAFLQEGF-VHVLRLD 287 (293)
T ss_pred CCHHHHHHHHHH---CCCHHHHHHHHH-HCCCCEEEEECHHH--HEEEEECCHHHHHHHHHHHHHHHHHCCE-EEEECCC
T ss_conf 002235678763---856999999999-78997899987411--1248977889999999999997643888-9990469
Q ss_pred -CCCC
Q ss_conf -4564
Q gi|254781017|r 318 -HSTS 321 (324)
Q Consensus 318 -~~~~ 321 (324)
T Consensus 288 ~~G~~ 292 (293)
T PRK01212 288 TAGAR 292 (293)
T ss_pred CCCCC
T ss_conf 99888