HHsearch alignment for GI: 254781017 and conserved domain: PRK03288
>PRK03288 consensus.
Probab=99.87 E-value=3.3e-20 Score=147.07 Aligned_cols=236 Identities=17% Similarity=0.186 Sum_probs=160.1
Q ss_pred EECCEEEEEE---------CCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 9717049997---------4353308942898776772899999868984999953644446566120150899999999
Q gi|254781017|r 10 VSAPGSLVLM---------GEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAI 80 (324)
Q Consensus 10 ~~aPGKv~L~---------GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l 80 (324)
T Consensus 5 ~~APAKINL~L~V~gkR~DGYH~----i~S~~~~idl~D~i~i~~~~~~~i~~~~~~~~~~~-----~~Nlv~ka~~~l~ 75 (283)
T PRK03288 5 WPSPAKLNLFLYITGQRADGYHT----LQTLFQFLDYGDTLTIEPRDDGEIRLLTPVEGVEN-----EDNLIVRAARLLM 75 (283)
T ss_pred CCCCEEEECCCCCCCCCCCCCCE----EEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCC-----CCCHHHHHHHHHH
T ss_conf 78601581140338869999872----57899981788299999989997899558767877-----5418999999999
Q ss_pred HHH------CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 971------87787389998268753548874024566556777640456666014557888877652146887544776
Q gi|254781017|r 81 NHI------KPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAAS 154 (324)
Q Consensus 81 ~~~------~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~ 154 (324)
T Consensus 76 ~~~~~~~~~~~~~g~~I~l~KnIPv~AGLGGGSSdAAa~L~~L~~l-~~l~ls~~~l~~ia~~i---------GaDVPff 145 (283)
T PRK03288 76 KTAADSGRLPAGSGADISIDKRLPMGGGLGGGSSNAATVLVALNHL-WQCGLSDDELAELGLTL---------GADVPVF 145 (283)
T ss_pred HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH---------CCCCCCE
T ss_conf 9764402456666607999436764456787761599999999998-58999999999999985---------8983105
Q ss_pred HCCCEEEEEECCCEEEEEECC-CCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCH
Q ss_conf 629858998527515673047-7752676584179899998889988608234899999998403320788987304864
Q gi|254781017|r 155 IHGGLICYQMPKYSIEKIDFI-FPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNL 233 (324)
Q Consensus 155 ~~Gg~i~~~~~~~~~~~~~~~-~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~ 233 (324)
T Consensus 146 l~~~~a~~~G~Ge~l~~~~~~~~~~llv~P~~~vST~~vy~~~~~-~~~~~~-----~~-------~-~~~l~~~~~Ndl 211 (283)
T PRK03288 146 VRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPEL-PRNTPK-----RS-------I-ETLLKCEFSNDC 211 (283)
T ss_pred ECCCCEEEECCCCEEEECCCCCCEEEEECCCCCCCHHHHHCCCCC-CCCCCC-----CC-------H-HHHHHCHHCCCH
T ss_conf 427758998288681476778756999899999782898449444-678753-----48-------9-999737110646
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHH
Q ss_conf 456899999899998616787799999999997199459972689975489998466532689
Q gi|254781017|r 234 KVLAQAMNRQQGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLP 296 (324)
Q Consensus 234 ~~l~~lm~~~~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~ 296 (324)
T Consensus 212 e~~a~--~-------~----~peI~~~~~~l~~~~---~~~MSGSGS--t~Fglf~~~~~A~k 256 (283)
T PRK03288 212 EVIAR--K-------R----FREVDAALSWLLEYA---PSRLTGTGA--CVFAEFDTESEARQ 256 (283)
T ss_pred HHHHH--H-------H----HHHHHHHHHHHHCCC---CCCEECHHH--EEEEEECCHHHHHH
T ss_conf 99998--7-------5----599999999985539---871226404--17999899999999