HHsearch alignment for GI: 254781017 and conserved domain: PRK03926

>PRK03926 mevalonate kinase; Provisional.
Probab=100.00  E-value=0  Score=442.00  Aligned_cols=299  Identities=32%  Similarity=0.430  Sum_probs=260.4

Q ss_pred             EEEEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHCCC
Q ss_conf             89997170499974353308942898776772899999868984999953644446566120150899999999971877
Q gi|254781017|r    7 KICVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAINHIKPS   86 (324)
Q Consensus         7 ki~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~   86 (324)
T Consensus         2 mi~asAPGrv~LiGEH~v~~G~~aia~AI~~~~~v~~~~~~d~-i~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~   74 (302)
T PRK03926          2 MVLCSAPGKIYLFGEHAVVYGKPAIACAIDLRTRVRAELNDDS-IYIQSDYGK------TGEVHPYVRAAIEKVREEADK   74 (302)
T ss_pred             EEEEEECEEEEEEECCEEECCCEEEEEEECCCEEEEEEECCCE-EEEECCCCC------CCCHHHHHHHHHHHHHHHCCC
T ss_conf             7999807899999387698696089999378199999998990-699754776------542007999999999975689


Q ss_pred             CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEECC
Q ss_conf             87389998268753548874024566556777640456666014557888877652146887544776629858998527
Q gi|254781017|r   87 CGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLICYQMPK  166 (324)
Q Consensus        87 ~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i~~~~~~  166 (324)
T Consensus        75 ~G~~i~I~S~iP~gaGLgSSAAl~va~~~al~~~-~g~~ls~~~la~la~~~E~~~~G~~sGiD~~~s~~Gg~~~~~~~~  153 (302)
T PRK03926         75 DGVDLSITSQIPVGSGLGSSAAVTVATIGALNKL-LGLGLSLEEIAKMGHEVELLVQGAASPTDTYVSTIGGFVTIPDRK  153 (302)
T ss_pred             CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCC
T ss_conf             9837999656887778763899999999999985-489989999999999999874689978899999759989966789


Q ss_pred             CEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             51567304777526765841798999988899886082348999999984033207889873048644568999998999
Q gi|254781017|r  167 YSIEKIDFIFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQGL  246 (324)
Q Consensus       167 ~~~~~~~~~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~  246 (324)
T Consensus       154 ~-l~--~~~~~l~l~~tg~~~~t~~~v~~v~~~~~~~~~---~~~~~~~~~~~i~~~a~~~l~~~d~~~lG~Lm~~~h~l  227 (302)
T PRK03926        154 K-LP--FMDCGIVVGYTGSSGSTKELVANVRKLYEEYPE---LIEPILESIGKLSEKAEELVLSGDYVSIGELMNINQGL  227 (302)
T ss_pred             C-CC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             7-77--789788999839746599999999999876699---99999999999999999877656499999999996887


Q ss_pred             HHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC-CCCCCCCC
Q ss_conf             9861678779999999999719945997268997548999846653268999999999977978999414-54564459
Q gi|254781017|r  247 LETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDIVPITP-SHSTSLYR  324 (324)
Q Consensus       247 L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~  324 (324)
T Consensus       228 l~~lgVS~peld~lv~~a~~-~GalGAKltGaG~GGc~iaL~~~d~----~~~v~~al~~ag~~~~~~~~~~~g~~~~~  301 (302)
T PRK03926        228 LDALGVSTKELSELVYAART-AGAFGAKITGAGGGGCMVALTAPDK----CREVATAIGIAGGKPMITKPTEEGLRIEE  301 (302)
T ss_pred             HHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCCEEEEEECCCC----HHHHHHHHHHCCCEEEEEEECCCCEEEEC
T ss_conf             87316898899999999996-7982888058987628999946131----99999999976996899567798237514