HHsearch alignment for GI: 254781017 and conserved domain: PRK05905
>PRK05905 hypothetical protein; Provisional.
Probab=99.79 E-value=3.3e-17 Score=128.09 Aligned_cols=243 Identities=12% Similarity=0.053 Sum_probs=149.8
Q ss_pred EEECCEEEEEECC----CEEECCCE---EEEEEE-CCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 9971704999743----53308942---898776-772899999868984999953644446566120150899999999
Q gi|254781017|r 9 CVSAPGSLVLMGE----HGVLHGHA---ALVFAI-NKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAI 80 (324)
Q Consensus 9 ~~~aPGKv~L~GE----h~v~~G~~---ai~~aI-~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l 80 (324)
T Consensus 2 k~ks~AKINL~L~I~~kr~d-~GyH~l~S~f~~i~~l~D~i~i~~~~~~~~~i~~~~~~~~~-~--~~~~ni~~ka~~~l 77 (258)
T PRK05905 2 KYKSYAKINLGLSIYKKCKK-VTKHKLESIFILVENVYDDIEIEKIEKNIDDIHYFDETNEI-L--VYSRLILVKTLEWL 77 (258)
T ss_pred CCCCCCCCCCCEEECCCCCC-CCCEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCC-C--CCHHHHHHHHHHHH
T ss_conf 36535507145224877889-99668999999937887299999877998759970887667-7--82469999999999
Q ss_pred -HHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCC-C
Q ss_conf -97187787389998268753548874024566556777640456666014557888877652146887544776629-8
Q gi|254781017|r 81 -NHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHG-G 158 (324)
Q Consensus 81 -~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~G-g 158 (324)
T Consensus 78 ~~~~~~~~~~~I~l~K~IP~gAGLGGGSSnAAa~L~~L~~~~---~l~~~~l~~ia~~l---------GsDVPffl~~~~ 145 (258)
T PRK05905 78 RDKYNIKNHFKIKIKKRIPIGSGLGSGSSNAAVLMKWILEFE---GINEINYKDVVNKL---------GSDIPFFLSGYK 145 (258)
T ss_pred HHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC---CCCHHHHHHHHHHH---------CCCCCEEECCCC
T ss_conf 886099986699999458765677875277999999999865---99989999999861---------899887981687
Q ss_pred EEEEEECCCEEEEEEC--CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH
Q ss_conf 5899852751567304--77752676584179899998889988608234899999998403320788987304864456
Q gi|254781017|r 159 LICYQMPKYSIEKIDF--IFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVL 236 (324)
Q Consensus 159 ~i~~~~~~~~~~~~~~--~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l 236 (324)
T Consensus 146 ~a~~~G~GE~l~~l~~~~~~~~llv~P~~~~ST~~vy~~~~~~~~~~---~~~~~~~~~~---~-~~~~~~~~~Ndle~~ 218 (258)
T PRK05905 146 TAYISDYGSQVEDLIGQFKLTYKVIFMNVNVSTKKVFEKFDDNQHVI---KNNFKTIIKN---L-KENIVVNIHNDLQEP 218 (258)
T ss_pred CEEEECCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCC---CCHHHHHHHH---H-HHHHHHCCCCCHHHH
T ss_conf 38998788778888778775299992799957599997226244456---3107888876---6-777763370173999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCC
Q ss_conf 8999998999986167877999999999971994599726899754899984665
Q gi|254781017|r 237 AQAMNRQQGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGD 291 (324)
Q Consensus 237 ~~lm~~~~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~ 291 (324)
T Consensus 219 ~--~~-----------~~P~i~~~~~~l~~-~~-~~~~MSGSGS--t~F~i~~~~ 256 (258)
T PRK05905 219 C--FE-----------LYPNLLYKYNELLN-DG-FYTILSGAGS--SFIVIKKIN 256 (258)
T ss_pred H--HH-----------HCHHHHHHHHHHHC-CC-CCEEEECCCC--CEEEEEECC
T ss_conf 9--98-----------79799999999867-99-8389976371--489999636