HHsearch alignment for GI: 254781017 and conserved domain: PTZ00299
>PTZ00299 homoserine kinase; Provisional.
Probab=99.94 E-value=4.9e-25 Score=177.59 Aligned_cols=293 Identities=16% Similarity=0.126 Sum_probs=195.9
Q ss_pred CCCCCCEEEEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 99888789997170499974353308942898776772899999868984999953644446566120150899999999
Q gi|254781017|r 1 MGQCLHKICVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAI 80 (324)
Q Consensus 1 ~~~~~~ki~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l 80 (324)
T Consensus 1 ~~~~~~kV~V~VPATsANLGp-----GFD~LGlAL~ly~ev~v~~~~~~~i~i~g~g~---~~ip~d~~Nlv~~a~~~~~ 72 (336)
T PTZ00299 1 MSPLPKKVVLRVPATTANIGP-----AYDTLGMALSIFMELTVEHADAFSMTVEGEGS---EHISTDEDNMVVQACRLAF 72 (336)
T ss_pred CCCCCCEEEEEECCCHHHCCC-----CHHHHHHHCCCCCEEEEEECCCCEEEEEECCC---CCCCCCCCCHHHHHHHHHH
T ss_conf 998897599996744464452-----36752530367748999988971799970677---7799996114999999999
Q ss_pred HHHC--CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHCCCCCCHHHHH-H
Q ss_conf 9718--778738999826875354887402456655677764045666---601455788887765214688754477-6
Q gi|254781017|r 81 NHIK--PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEP---SPDEILTTAHAIVLKVQGISSGIDLAA-S 154 (324)
Q Consensus 81 ~~~~--~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~---~~~~i~~lA~~~E~~~~g~~sG~D~~a-~ 154 (324)
T Consensus 73 ~~~~~~~~~~~~i~i~~~IP~~rGLGSSAaAiVaG~~aan~L~-g~~l~~~~~~~ll~~a~~~E----gHP---DNVAPA 144 (336)
T PTZ00299 73 EEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAGFVAGMKLC-GLTMETENEEALLQAIAKFE----GHP---DNAAPA 144 (336)
T ss_pred HHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHC----CCC---CCCCCC
T ss_conf 9856978896389983688876675138899999999999862-68877558999999876216----897---455432
Q ss_pred HCCCEEEE-EECCCEEE--EEECCCC--CCEEECC--CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 62985899-85275156--7304777--5267658--4179899998889988608234899999998403320788987
Q gi|254781017|r 155 IHGGLICY-QMPKYSIE--KIDFIFP--IHLIYSG--YKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQA 227 (324)
Q Consensus 155 ~~Gg~i~~-~~~~~~~~--~~~~~~~--l~l~~tg--~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~a 227 (324)
T Consensus 145 llGG~~l~~~~~~~~~~~~~ip~p~~l~~Vv~iP~~~~~lsT~~AR~vL---P~~v~~~-daV~n----~~-r~a~lv~a 215 (336)
T PTZ00299 145 IYGGIQLVYKKDNGRFLTYRVPTPPNLSVVLFVPHNKMKANTHVTRNLI---PTSVSLE-DAVFN----IS-RTSILVLA 215 (336)
T ss_pred CCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEECHHHHHHHC---CCCCCHH-HHHHH----HH-HHHHHHHH
T ss_conf 4588699997289827999779998848999978976330689999658---6768899-99999----99-99999999
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECC------------CCCHH
Q ss_conf 304864456899999899998616787799999999997199459972689975489998466------------53268
Q gi|254781017|r 228 LRNKNLKVLAQAMNRQQGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKG------------DLNSL 295 (324)
Q Consensus 228 l~~~d~~~l~~lm~~~~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~------------~~~~~ 295 (324)
T Consensus 216 l~~~d~~ll~~~~D~ihepyR~-~~LiP~~~~v~~~-a~~aGA~g~~iSGAGP--Ti~Al~~g~~~~~~~~~~~~~~a~~ 291 (336)
T PTZ00299 216 LSTGDLRMLKSCSDKLHEQQRS-DALFPHFRPCVKA-AREAGAHYAFLSGAGP--SVCALVGGRHGDPLTQPREERKAES 291 (336)
T ss_pred HHCCCHHHHHHCCCEEECCCHH-HHCCCCHHHHHHH-HHHCCCEEEEEECHHH--HHHEEECCCCCCCCCCCCHHHHHHH
T ss_conf 9549898997487348652023-3226279999999-9878994999976422--2442621556653224410345999
Q ss_pred HHHHHHHHHHHCCCE--EEEEECC-CCCCC
Q ss_conf 999999999977978--9994145-45644
Q gi|254781017|r 296 PYQSVNCHMHAKGID--IVPITPS-HSTSL 322 (324)
Q Consensus 296 ~~~~~~~~~~~~g~~--~~~~~~~-~~~~~ 322 (324)
T Consensus 292 V~~aM~~a~~~~gi~~~~~i~~~~~~G~~v 321 (336)
T PTZ00299 292 VAEAMIKAAEAVGVAGRVIITQPSDQGVHL 321 (336)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCEE
T ss_conf 999999999986984589993467788789