HHsearch alignment for GI: 254781017 and conserved domain: TIGR01219
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase; InterPro: IPR016005 Phosphomevalonate kinase (2.7.4.2 from EC) catalyzes the phosphorylation of 5-phosphomevalonate into 5-diphosphomevalonate, an essential step in isoprenoid biosynthesis via the mevalonate pathway. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the higher eukaryotic form and the ERG8 type . This model represents plant and fungal forms of the ERG8 type of phosphomevalonate kinase..
Probab=99.97 E-value=6e-29 Score=202.37 Aligned_cols=308 Identities=19% Similarity=0.287 Sum_probs=212.8
Q ss_pred EEECCEEEEEECCCEEEC-CCEEEEEEECCEEEEEEEECCCC-----------EEEEEEC---CCCCCCCCCHH------
Q ss_conf 997170499974353308-94289877677289999986898-----------4999953---64444656612------
Q gi|254781017|r 9 CVSAPGSLVLMGEHGVLH-GHAALVFAINKRVILYLTLRKDR-----------LINIDSS---LGQYCGSLDLA------ 67 (324)
Q Consensus 9 ~~~aPGKv~L~GEh~v~~-G~~ai~~aI~~~~~~~~~~~~~~-----------~i~i~~~---~~~~~~~~~~~------ 67 (324)
T Consensus 1 ~~SAPGKvL~aGGYlVLd~~y~glV~gl~Ar~yA~~~p~~~~~gPesW~~K~t~VrvkSpQf~~~EwlY~is~~~~~~~~ 80 (499)
T TIGR01219 1 VASAPGKVLLAGGYLVLDKKYEGLVVGLSARFYAVVKPLDEKVGPESWADKFTEVRVKSPQFKDAEWLYKISLKVSHLRL 80 (499)
T ss_pred CCCCCCCHHHHCCEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCEEE
T ss_conf 97687547563854466477660688640414688610122458651002123567636643465200221564461589
Q ss_pred -----------HCCCHHHHHHH-HHH--HHCCC-------CCEEEEEECC--------------CC--------------
Q ss_conf -----------01508999999-999--71877-------8738999826--------------87--------------
Q gi|254781017|r 68 -----------MFHPSFSFIIM-AIN--HIKPS-------CGFDLKVISQ--------------LD-------------- 98 (324)
Q Consensus 68 -----------~~~~~~~~i~~-~l~--~~~~~-------~g~~i~i~s~--------------iP-------------- 98 (324)
T Consensus 81 ~~~~~~~s~~~~~npfiq~aia~v~~atyf~~~~~~~l~~q~l~iti~~dnayysqrnqiesaGlPltp~s~~~~~~~~~ 160 (499)
T TIGR01219 81 QSVYASVSLEKSKNPFIQLAIAAVFSATYFKKESRDKLLLQDLDITILSDNAYYSQRNQIESAGLPLTPESLTELASYAK 160 (499)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 88864123688866689999999987542165320026331622689633522444331210578567212455577752
Q ss_pred -----------------CCCCCCCCCHHHHHHHHHHHHHHCCCC------------CCCHHHHHHHHHHHHHHCCC-CCC
Q ss_conf -----------------535488740245665567776404566------------66014557888877652146-887
Q gi|254781017|r 99 -----------------SQLGLGSSAAITVAITAALLTLQYHKE------------PSPDEILTTAHAIVLKVQGI-SSG 148 (324)
Q Consensus 99 -----------------~g~GLGSSaa~~va~~~al~~~~~~~~------------~~~~~i~~lA~~~E~~~~g~-~sG 148 (324)
T Consensus 161 ~~F~~~~snGans~~eV~KTGLGSSAam~T~l~~aL~~~l~~~~~~~~dK~~K~~~S~~~viH~lAQ~aHC~AQGKvGSG 240 (499)
T TIGR01219 161 LSFLAAESNGANSLEEVAKTGLGSSAAMVTALVAALLLYLRSVDEDDVDKELKIDDSDKEVIHNLAQVAHCSAQGKVGSG 240 (499)
T ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 02202222565565553656763148999999999999865420457873433267504555544788886327853463
Q ss_pred HHHHHHHCCCEEEEEECCCEEEEE-------------------------------EC----CCCCCEEECC-CCCCHHHH
Q ss_conf 544776629858998527515673-------------------------------04----7775267658-41798999
Q gi|254781017|r 149 IDLAASIHGGLICYQMPKYSIEKI-------------------------------DF----IFPIHLIYSG-YKTPTAQV 192 (324)
Q Consensus 149 ~D~~a~~~Gg~i~~~~~~~~~~~~-------------------------------~~----~~~l~l~~tg-~~~~T~~~ 192 (324)
T Consensus 241 FDV~aA~yGS~rYrRF~P~lis~l~vPyd~~i~~~~~~~~l~~iv~~kw~Ni~~~~f~LP~~~~L~mGd~~sgGSsTp~m 320 (499)
T TIGR01219 241 FDVAAAVYGSIRYRRFDPELISQLLVPYDVDIKSLTYSEKLAKIVKEKWDNIKVKEFSLPALLTLLMGDVKSGGSSTPKM 320 (499)
T ss_pred HHHHHHHHCCEEEEECCHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHCCCCCCCCCCCHHH
T ss_conf 23777643351144468799964168601311457537899987412356530100457624475504437888673678
Q ss_pred HHHHHHHHHHCCCH-HH----HHHH---HHHHHCCCCH----------HHHH---HHCCCCH----------------HH
Q ss_conf 98889988608234-89----9999---9984033207----------8898---7304864----------------45
Q gi|254781017|r 193 LKKISYIEIEYPEI-NE----INQK---IYALMGKLSQ----------ISCQ---ALRNKNL----------------KV 235 (324)
Q Consensus 193 v~~v~~~~~~~~~~-~~----~~~~---~~~~~~~i~~----------~~~~---al~~~d~----------------~~ 235 (324)
T Consensus 321 V~kVk~Wq~s~pees~~~~~~L~~aN~~l~~~L~~L~~L~~~H~D~~~~~~~sCsvL~~~~c~l~~~~Pineaiike~~E 400 (499)
T TIGR01219 321 VKKVKKWQKSDPEESKEIYDDLDDANLRLEDKLSDLDKLAKDHDDVYLRVIKSCSVLESEDCVLSAEEPINEAIIKELLE 400 (499)
T ss_pred HHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH
T ss_conf 89997130158368898640366656788731347777652001367888765201212350331577457899999999
Q ss_pred HHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 6899999899998616------7877999999999971994599726899754899984665326899999999997797
Q gi|254781017|r 236 LAQAMNRQQGLLETLG------VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGI 309 (324)
Q Consensus 236 l~~lm~~~~~~L~~lg------vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~ 309 (324)
T Consensus 401 ~r~a~~~IRr~~r~it~ea~vdIEP~~QT~lLD~~~~l~GVl~~gvPGAGGfDAif~it~~~~d--~~~~~~~~w~~~~V 478 (499)
T TIGR01219 401 VREAVLSIRRLLRKITKEAKVDIEPEKQTSLLDDIESLEGVLLVGVPGAGGFDAIFVITLNDVD--LREKVIKAWKSDKV 478 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHH--HHHHHHHHHHHCCC
T ss_conf 9999999999999844550788887344334302002586368852898547899988740212--68899875642683
Q ss_pred EEEEEECCC
Q ss_conf 899941454
Q gi|254781017|r 310 DIVPITPSH 318 (324)
Q Consensus 310 ~~~~~~~~~ 318 (324)
T Consensus 479 ~~ldV~~a~ 487 (499)
T TIGR01219 479 LALDVSEAD 487 (499)
T ss_pred EEEEECCCC
T ss_conf 477604587