HHsearch results for GI: 254781017 and protein with PDBid: 1fi4_A
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, cholesterol biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2
Probab=99.70 E-value=1.3e-13 Score=103.84 Aligned_cols=281 Identities=14% Similarity=0.142 Sum_probs=158.7
Q ss_pred CCCCC--EEEEECCEEEEEECCCE--E----ECCCEEEEEEEC---CEEEEEEEECCCCE---EEEEECCCCCCCCCCHH
Q ss_conf 98887--89997170499974353--3----089428987767---72899999868984---99995364444656612
Q gi|254781017|r 2 GQCLH--KICVSAPGSLVLMGEHG--V----LHGHAALVFAIN---KRVILYLTLRKDRL---INIDSSLGQYCGSLDLA 67 (324)
Q Consensus 2 ~~~~~--ki~~~aPGKv~L~GEh~--v----~~G~~ai~~aI~---~~~~~~~~~~~~~~---i~i~~~~~~~~~~~~~~ 67 (324)
|.-|. +.+|+||-.|-|+=..- + +==.+.|+++++ .++..+++.+++.. +.++.. ....+..
T Consensus 18 ~~~~~~~~~t~~AP~NIAlIKYWGKrd~~l~lP~n~SiS~TL~~d~~~T~Ttv~~s~~~~~d~~~lNG~----~~~~~~~ 93 (416)
T 1fi4_A 18 GSHMTVYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFERDTLWLNGE----PHSIDNE 93 (416)
T ss_dssp -----CEEEEEEECCEEEEECCCCEEETTTTEESSCEEEEEBCTTTSCEEEEEEECTTCCSCBCTTTCC----BSSSSSS
T ss_pred CCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEECCE----ECCCCCH
T ss_conf 870389999997534332640157668767899998147893699987789999788887787999998----6576308
Q ss_pred HCCCHHHHHHHH---HHHHC------CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 015089999999---99718------778738999826875354887402456655677764045666601455788887
Q gi|254781017|r 68 MFHPSFSFIIMA---INHIK------PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAI 138 (324)
Q Consensus 68 ~~~~~~~~i~~~---l~~~~------~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~ 138 (324)
.....++.+... +.... ....++|...+++|.++||+||||..+|++.++..+ ++.+++..++.++|...
T Consensus 94 r~~~~l~~ir~l~~~~~~~~~~~~~~~~~~l~I~S~NnfPtaaGLASSASg~AAl~~al~~l-~~~~l~~~elS~lAR~G 172 (416)
T 1fi4_A 94 RTQNCLRDLRQLRKEMESKDASLPTLSQWKLHIVSENNFPTAAGLASSAAGFAALVSAIAKL-YQLPQSTSEISRIARKG 172 (416)
T ss_dssp SHHHHHHHHHHHHHHHHTTCTTSCCGGGSCEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHH-TTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHC
T ss_conf 89999999999998754012246533462289999568842246888999999999999998-56778889999998610
Q ss_pred HHHHCCCCCCHHHHHHHCCCEEEEEECCCE------EEEEE----CC-CC--CCEEECCCC-C-CHHHHHHHHHHHHHHC
Q ss_conf 765214688754477662985899852751------56730----47-77--526765841-7-9899998889988608
Q gi|254781017|r 139 VLKVQGISSGIDLAASIHGGLICYQMPKYS------IEKID----FI-FP--IHLIYSGYK-T-PTAQVLKKISYIEIEY 203 (324)
Q Consensus 139 E~~~~g~~sG~D~~a~~~Gg~i~~~~~~~~------~~~~~----~~-~~--l~l~~tg~~-~-~T~~~v~~v~~~~~~~ 203 (324)
+ | -.+.|+|||++.+..+... ..++. ++ .. +++++...+ . +|..+.. .....
T Consensus 173 S--------G-SAcRSi~GG~v~W~~g~~~dgsds~A~~v~~~~~~p~l~~iilvv~~~~K~vsST~gm~~----~v~tS 239 (416)
T 1fi4_A 173 S--------G-SACRSLFGGYVAWEMGKAEDGHDSMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQL----TVATS 239 (416)
T ss_dssp H--------G-GGGGGGSSSEEEEECCSCTTCTTCEEEEEECGGGSTTEEEEEEEECCCSCCCCHHHHHHH----HHHHC
T ss_pred C--------C-CHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHC----CCCCC
T ss_conf 6--------3-445564088778437888778763478715655664400389983466555656310111----54557
Q ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH--C------CCCHHHH---HHHHHHHHC-CCCE
Q ss_conf 23489999999840332078898730486445689999989999861--6------7877999---999999971-9945
Q gi|254781017|r 204 PEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQGLLETL--G------VSDSKLS---EIVWKLREQ-PHIM 271 (324)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~l--g------vs~~~l~---~li~~~~~~-~g~~ 271 (324)
|.+.+..+.. ..+...+...|++++|++.|++++-..-..|.++ . .-+|... ++|+..++. ++..
T Consensus 240 ~~~~~~~~~~---a~~~~~~m~~Ai~~~Df~~~~ei~e~ds~~mHa~~l~s~Ppi~Y~~~~s~~ii~~v~~~r~~~~~~~ 316 (416)
T 1fi4_A 240 ELFKERIEHV---VPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGETI 316 (416)
T ss_dssp SHHHHHHHTH---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 5789999875---0668999999998389999999999989999999863699847568427999999999998638972
Q ss_pred EEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9972689975489998466532689999999999
Q gi|254781017|r 272 ASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMH 305 (324)
Q Consensus 272 ~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~ 305 (324)
.+-..+||+ .+..|++.+..+.+.+.+...+.
T Consensus 317 ~~yT~DAGP--Nv~il~~~~~~~~v~~~l~~~f~ 348 (416)
T 1fi4_A 317 VAYTFDAGP--NAVLYYLAENESKLFAFIYKLFG 348 (416)
T ss_dssp EEEEECSSS--CEEEEEEGGGHHHHHHHHHHHHT
T ss_pred EEEEECCCC--CEEEEECHHHHHHHHHHHHHHCC
T ss_conf 899967887--77999747669999999999769