HHsearch results for GI: 254781017 and protein with PDBid: 1pie_A
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7
Probab=100.00 E-value=0 Score=366.54 Aligned_cols=321 Identities=18% Similarity=0.242 Sum_probs=245.7
Q ss_pred CCCCCEEEEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCC----CC------HHHCCC
Q ss_conf 98887899971704999743533089428987767728999998689849999536444465----66------120150
Q gi|254781017|r 2 GQCLHKICVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGS----LD------LAMFHP 71 (324)
Q Consensus 2 ~~~~~ki~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~----~~------~~~~~~ 71 (324)
|+.|+-..++|||||+|||||+||+|++||++|||+++++.+++++++.+++.+...+.... ++ ...|.+
T Consensus 43 g~~~~~~~~~APGRv~L~GEH~Dy~Gg~vl~~AI~~~~~v~v~~~~d~~i~i~s~~~~~~~~~~~~~~~~~~~~~~~w~~ 122 (419)
T 1pie_A 43 GDTKEVEYFFSPGRINLIGEHTDYNGGYVFPASITIGTTGLARLREDKKVKLYSENFPKLGVIEFDLDEVEKKDGELWSN 122 (419)
T ss_dssp SCCCSCEEEEEEEEEEEECCSCTTTTCEEEEEEEEEEEEEEEEECSSSEEEEEETTCGGGCCEEEETTCTTSCCTTCTHH
T ss_pred CCCCCCEEEECCCEEEEECCCEEECCCCEEEEEHHHCEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHH
T ss_conf 89987169980013899628735789716926840086999999999989999899998607996040014566520688
Q ss_pred HHHHHHHHHHHHC--CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-
Q ss_conf 8999999999718--7787389998268753548874024566556777640456666014557888877652146887-
Q gi|254781017|r 72 SFSFIIMAINHIK--PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSG- 148 (324)
Q Consensus 72 ~~~~i~~~l~~~~--~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG- 148 (324)
++..+...+.... ...||++.++|++|.|+|||||||++|+++.++..+ .+..+++.+++++++.+|+.++|.+||
T Consensus 123 y~~~~~~~l~~~~~~~~~G~~i~v~s~vP~gsGLsSSAAl~va~~~al~~~-~~~~~~~~~l~~l~~~~E~~~~g~~~G~ 201 (419)
T 1pie_A 123 YVKGMIVMLKGAGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDL-FNLNVPRLELVQLGQKTENDYIGVNSGI 201 (419)
T ss_dssp HHHHHHHHHHHTTCCCCSCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 899999999983898788769999557886667663688888999899998-5898767889999999998631788763
Q ss_pred HHHHHHHCCCE---EEEEECCCEEEEEECCC---CCCEEECCCCCCHHHHH---------HHHHHHHHHC--CCH-----
Q ss_conf 54477662985---89985275156730477---75267658417989999---------8889988608--234-----
Q gi|254781017|r 149 IDLAASIHGGL---ICYQMPKYSIEKIDFIF---PIHLIYSGYKTPTAQVL---------KKISYIEIEY--PEI----- 206 (324)
Q Consensus 149 ~D~~a~~~Gg~---i~~~~~~~~~~~~~~~~---~l~l~~tg~~~~T~~~v---------~~v~~~~~~~--~~~----- 206 (324)
+||+++.+|+. +++++........+.+. .+++++++.++.+.... .......... ...
T Consensus 202 ~Dq~as~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~~~~r~~e~~~a~~~~~~~~~~~~~~~~~~ 281 (419)
T 1pie_A 202 LDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPRALTESKYNERFAETREALKRMQTRLDIQSLGELSN 281 (419)
T ss_dssp HHHHHHHHCBTTEEEEEETTTCCEEEEECCCTTEEEEEEECCCCCCTTCHHHHHHHHHHHHHHHHHHHHCCCSSGGGCCH
T ss_pred CHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 14788850753301000014543323556887867999625865534311234558888999999877417320778879
Q ss_pred ------------HHHHHHH--HHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHCCCCE
Q ss_conf ------------8999999--984033207889873048644568999998999986-1678779999999999719945
Q gi|254781017|r 207 ------------NEINQKI--YALMGKLSQISCQALRNKNLKVLAQAMNRQQGLLET-LGVSDSKLSEIVWKLREQPHIM 271 (324)
Q Consensus 207 ------------~~~~~~~--~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~-lgvs~~~l~~li~~~~~~~g~~ 271 (324)
....+.. .......+.++.++++++|++.||++||++|.+|++ ++||+|++|++++.+++.+|++
T Consensus 282 ~~~~~~~~~~~~~~~~~ra~~~~~e~~rv~~~~~al~~~d~~~lG~Lm~esh~sL~~~~~vS~peLd~lv~~a~~~~Ga~ 361 (419)
T 1pie_A 282 EEFDANTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVL 361 (419)
T ss_dssp HHHHHTGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCE
T ss_conf 88999875037788999998650688999999987532778889999999999999975799799999999999848957
Q ss_pred EEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC-C--CEEEEEECCCCCCCC
Q ss_conf 997268997548999846653268999999999977-9--789994145456445
Q gi|254781017|r 272 ASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAK-G--IDIVPITPSHSTSLY 323 (324)
Q Consensus 272 ~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~-g--~~~~~~~~~~~~~~~ 323 (324)
|+|+||||||||+++|++++..+.+++.+++.+.++ | ...+..+|+.|..+.
T Consensus 362 GaKltGAG~GGc~iaLv~~~~~~~~~~~l~~~y~~~~g~~~~~~~~~p~~Ga~~~ 416 (419)
T 1pie_A 362 GARMTGAGFGGCAIALVAHDNVSAFRKAVGQVYEEVVGYPASFYVAQIGSGSTKL 416 (419)
T ss_dssp EEEECSSCSSSEEEEEEEGGGHHHHHHHHHHHHHHHHSSCCEEEECCBCCCSBCC
T ss_pred EEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEC
T ss_conf 9897057877289999760589999999999999841999739999658883672