HHsearch results for GI: 254781017 and protein with PDBid: 1uek_A
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5
Probab=99.90 E-value=3.9e-21 Score=151.53 Aligned_cols=258 Identities=14% Similarity=0.141 Sum_probs=161.7
Q ss_pred EEECCEEEEEECC----CEEECCC---EEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHH
Q ss_conf 9971704999743----5330894---28987767728999998689849999536444465661201508999999999
Q gi|254781017|r 9 CVSAPGSLVLMGE----HGVLHGH---AALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAIN 81 (324)
Q Consensus 9 ~~~aPGKv~L~GE----h~v~~G~---~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 81 (324)
+.-||+||||+=+ .. .|+ ..+-.+||++..+++++.+++ +.++.. .+..+-..+.+....+
T Consensus 2 ~~~spAKINL~L~i~~kr~--dGyH~i~s~~~~i~l~D~i~i~~~~~~-~~~~~p---------~~~~Nlv~ka~~~~~~ 69 (275)
T 1uek_A 2 ERLAPAKVNLGLSVRFRRE--DGYHELHTLFAPFSLADRLVVEPVSSG-LHFQGP---------YGRENLAYRAASLYLE 69 (275)
T ss_dssp EEEEEEEEEEEEEEEEECT--TSSEEEEEEEEEEEEEEEEEEEEESSC-EEEEST---------TGGGSHHHHHHHHHHH
T ss_pred CEECCCEECCCEEECCCCC--CCCCEEEEEEEEECCCEEEEEEECCCC-CEECCC---------CCCCHHHHHHHHHHHH
T ss_conf 6522520732500078589--997523689999367539999987899-478689---------9842389999999888
Q ss_pred HHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEE
Q ss_conf 71877873899982687535488740245665567776404566660145578888776521468875447766298589
Q gi|254781017|r 82 HIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLIC 161 (324)
Q Consensus 82 ~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i~ 161 (324)
......+++|+++++||+++|||||||.++|++.+++++. ... .++.++|..+ |.|+.++.+|+..+
T Consensus 70 ~~~~~~~~~I~i~K~IP~gaGLGggSs~aaa~l~~~~~~~-~~~---~~l~~~a~~l---------GsDvp~fl~g~~a~ 136 (275)
T 1uek_A 70 AAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALY-PAE---VDLFALARTL---------GADVPFFLLGRGAE 136 (275)
T ss_dssp HTTCCCEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHS-CSC---CCHHHHHHHH---------CTTHHHHHHCSEEE
T ss_pred HHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-CCC---HHHHHHHHHH---------CCCCCCCCCCCCCE
T ss_conf 6289777699998589976767735799999999987643-540---4799999972---------87765311686631
Q ss_pred EEECCCEEEEEECC-CCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
Q ss_conf 98527515673047-77526765841798999988899886082348999999984033207889873048644568999
Q gi|254781017|r 162 YQMPKYSIEKIDFI-FPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAM 240 (324)
Q Consensus 162 ~~~~~~~~~~~~~~-~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm 240 (324)
.......+.+++.+ ..++++..+...+|+++.+.+.......... .+...+++..++...+..-+
T Consensus 137 ~~g~Ge~l~~~~~~~~~~vlv~P~~~iST~~ay~~~~~~~~~~~~~--------------~~~~~~~l~~~~~~~~~NdL 202 (275)
T 1uek_A 137 ARGVGERLKPLALPPVPAVVFFPGLRVPTPLVYRAVRPEDFGPDLP--------------VEAILEALARGEEPPYWNSL 202 (275)
T ss_dssp EETTTTEEEEECCCCEEEEEEECCCCCCHHHHHHTCCGGGCCCCCC--------------HHHHHHHHHHTCCCSCCBTT
T ss_pred ECCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHH--------------HHHHHHHHHHHHHHHHHCCH
T ss_conf 1256420267114654225514776777699998742431585124--------------78899987642056654554
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECC
Q ss_conf 99899998616787799999999997199459972689975489998466532689999999999779-789994145
Q gi|254781017|r 241 NRQQGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKG-IDIVPITPS 317 (324)
Q Consensus 241 ~~~~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~ 317 (324)
..... ++ .|+++++.+.+.+ .|++++.|||+|+ |+++|++++.++ +++.+.+.+.+ +|.-.+.-.
T Consensus 203 e~~~~---~l---~P~i~~i~~~l~~-~ga~~~~lSGSGs--t~fal~~~~~~a---~~~~~~l~~~~~~W~~~l~~~ 268 (275)
T 1uek_A 203 EGPAF---RL---FPELKEVRGRMRA-LGLRGVLMSGSGS--AFFGLAEGPDHA---RRAAEALRAWGRAWAGTLGGG 268 (275)
T ss_dssp HHHHH---HH---CTHHHHHHHHHHH-TTCEEEEECTTSS--CEEEECSSHHHH---HHHHHHHTTTSEEEEEEECCC
T ss_pred HHHHH---HH---CHHHHHHHHHHHH-CCCCEEEEECHHH--CEEEEECCHHHH---HHHHHHHHHCCCCEEEEECCC
T ss_conf 67998---86---8599999999996-7998699988412--468998999999---999999877599779994314