HHsearch results for GI: 254781017 and protein with PDBid: 2hk2_A
>2hk2_A Diphosphomevalonate decarboxylase; mevalonate diphosphate decarboxylase, lyase; 2.30A {Staphylococcus aureus} PDB: 2hk3_A
Probab=99.89 E-value=3.8e-21 Score=151.65 Aligned_cols=299 Identities=11% Similarity=0.029 Sum_probs=177.7
Q ss_pred CCCCCCEEEEECCEEEEEE---CCCEEEC---CCEEEEEEEC-CEEEEEEEECCCC-EEEEEECCCCCCCCCCHHHCCCH
Q ss_conf 9988878999717049997---4353308---9428987767-7289999986898-49999536444465661201508
Q gi|254781017|r 1 MGQCLHKICVSAPGSLVLM---GEHGVLH---GHAALVFAIN-KRVILYLTLRKDR-LINIDSSLGQYCGSLDLAMFHPS 72 (324)
Q Consensus 1 ~~~~~~ki~~~aPGKv~L~---GEh~v~~---G~~ai~~aI~-~~~~~~~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~ 72 (324)
|=|.|+..+++||-.+-|+ |-+-.-+ -.+.|++++| .+++.+++.+++. ...+....... +.......
T Consensus 2 ~~~~~~~~~a~a~~nialiKYwGk~d~~~~~P~n~SiS~tl~~~~t~t~v~~~~~~~~d~~~~ng~~~----~~~~~~~i 77 (331)
T 2hk2_A 2 MLEMIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTETKVTFNDQLTQDQFWLNGEKV----SGKELEKI 77 (331)
T ss_dssp HHHHCEEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEEEEEEEETTCCSCEEEETTEEE----CTHHHHHH
T ss_pred HHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCEEC----CCHHHHHH
T ss_conf 24415523998765068885227567777788998776897788017999980698851899999538----82688999
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 99999999971877873899982687535488740245665567776404566660145578888776521468875447
Q gi|254781017|r 73 FSFIIMAINHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLA 152 (324)
Q Consensus 73 ~~~i~~~l~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~ 152 (324)
.+++...-+......+++|++.+++|.++|||||||..+|++.|++.+ ++.+++.+++.++|...| | |.+
T Consensus 78 ~~~~~~~r~~~~~~~~~~I~s~n~iP~~~GLgSSAa~~aA~~~a~~~~-~~~~l~~~el~~lA~~gs--------G-s~~ 147 (331)
T 2hk2_A 78 SKYMDIVRNRAGIDWYAEIESDNFVPTAAGLASSASAYAALAAACNQA-LDMQLSDKDLSRLARIGS--------G-SAS 147 (331)
T ss_dssp HHHHHHHHHHHTCCCEEEEEEEEESCGGGTCCCHHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHTTC--------G-GGG
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHCC--------C-CCC
T ss_conf 999999998619987479999736875333257899999999999876-205799899999976428--------7-621
Q ss_pred HHHCCCEEEEEECCCE--E--EEEEC-----CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
Q ss_conf 7662985899852751--5--67304-----7775267658417989999888998860823489999999840332078
Q gi|254781017|r 153 ASIHGGLICYQMPKYS--I--EKIDF-----IFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQI 223 (324)
Q Consensus 153 a~~~Gg~i~~~~~~~~--~--~~~~~-----~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~ 223 (324)
.|.|||++.+...... . .++.. ....+++.......|....+......+..|...++.+... .....
T Consensus 148 ~si~GG~v~~~~~~~~~~~~~~~l~~~~~~~~~~~vi~~~~~~~k~~~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 223 (331)
T 2hk2_A 148 RSIYGGFAEWEKGYSDETSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHID----EDLAE 223 (331)
T ss_dssp GGGSSSEEEEECCSSTTTCEEEECCCTTGGGGEEEEEECCCCSSCCCCHHHHHHHHHHHCTTHHHHHHHHH----HHHHH
T ss_pred CCEECCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH----HHHHH
T ss_conf 01168766774478876633555404667875238999378545532455420001146608999998756----77999
Q ss_pred HHHHHCCCCHHHHHHHHHHH----HHHHHH--HC-----CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCC
Q ss_conf 89873048644568999998----999986--16-----78779999999999719945997268997548999846653
Q gi|254781017|r 224 SCQALRNKNLKVLAQAMNRQ----QGLLET--LG-----VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDL 292 (324)
Q Consensus 224 ~~~al~~~d~~~l~~lm~~~----~~~L~~--lg-----vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~ 292 (324)
...++.++|++.|++++... |..+.. .. ..++++.++++.+++ .|+.++-++|||+ .+++|++++.
T Consensus 224 l~~al~~~D~~~l~~~~e~d~~~~h~~~~~~~~~~~~~~~~t~~i~~~i~~~r~-~G~~~~~~sgAGP--tv~~l~~~~~ 300 (331)
T 2hk2_A 224 AKAAIQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHECRE-AGYPCYFTMDAGP--NVKILVEKKN 300 (331)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHHHHHHHHHHH-TTCCEEEECCSSS--CEEEEEEHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHH-CCCCEEEEECCCH--HEEEEECHHH
T ss_conf 999987699999999998768877998753478611004205999999999985-8984999956763--4499987868
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEC-CCCCCC
Q ss_conf 268999999999977978999414-545644
Q gi|254781017|r 293 NSLPYQSVNCHMHAKGIDIVPITP-SHSTSL 322 (324)
Q Consensus 293 ~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~ 322 (324)
.+++++.+..... ..+++.... ..|.++
T Consensus 301 ~~~v~~~l~~~f~--~~~~~i~~~~~~G~~i 329 (331)
T 2hk2_A 301 KQQIIDKLLTQFD--NNQIIDSDIIATGIEI 329 (331)
T ss_dssp HHHHHHHHTTTSC--GGGEEEEEBCCSCCEE
T ss_pred HHHHHHHHHHHCC--CCEEEEECCCCCCCEE
T ss_conf 9999999996499--7629996367988875