HHsearch results for GI: 254781017 and protein with PDBid: 3k85_A

>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=100.00  E-value=0  Score=363.37  Aligned_cols=303  Identities=17%  Similarity=0.157  Sum_probs=236.7

Q ss_pred             CCEEEEECCEEEEEECCCEEE------CCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCC------CCHHHCCCH
Q ss_conf             878999717049997435330------89428987767728999998689849999536444465------661201508
Q gi|254781017|r    5 LHKICVSAPGSLVLMGEHGVL------HGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGS------LDLAMFHPS   72 (324)
Q Consensus         5 ~~ki~~~aPGKv~L~GEh~v~------~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~------~~~~~~~~~   72 (324)
                      |+=|.+||||||+|+|||+||      ||+.+|++|||+|+++++++++++.+.+.+........      .....+...
T Consensus         1 ~~~i~~raP~RI~l~G~~tD~~~~~~~~gG~via~AId~~~~v~v~~~~~~~i~i~~~d~~~~~~~~~~~~~~~~~~~~~   80 (357)
T 3k85_A            1 MSLVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYCTIEETNSGRIEINAYDAQCCKSYLSMSQLEIDGEASL   80 (357)
T ss_dssp             --CEEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEEEEEEECSSSEEEEEETTTTEEEEEECCSSCCCCSSSHH
T ss_pred             CCEEEEECCEEEEEECCCCCCCHHHCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCHHHH
T ss_conf             96999989997898707636811334489799999986818999999999969999658885169812431234660678


Q ss_pred             HHHHH-HHHHH-HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-H
Q ss_conf             99999-99997-187787389998268753548874024566556777640456666014557888877652146887-5
Q gi|254781017|r   73 FSFII-MAINH-IKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSG-I  149 (324)
Q Consensus        73 ~~~i~-~~l~~-~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG-~  149 (324)
                      +...+ ..++. .....|++|.++|++|.|+|||||||++||++.|++.+ ++..+++++++++|+.+|..++|.+|| +
T Consensus        81 i~~~~~~~~~~~~~~~~g~~i~i~S~iP~gsGLGSSAA~~Va~~~al~~~-~~~~l~~~~l~~~a~~~E~~~~g~~~G~~  159 (357)
T 3k85_A           81 IKGVYNRIIRDYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEW-LSLPLGDYETSRLAYEIERKDLGLSGGKQ  159 (357)
T ss_dssp             HHHHHHHHHHHTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHTTTCCCCCSH
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99999999997278898759999657868889884068889889998865-54511538899999987665428987765


Q ss_pred             HHHHHHCCCEEEEEECCCEEEE---EEC--------CCCCCEEECCCCCCHHHHHHHHHHH-HHHCCCHHHHHHHHHHHH
Q ss_conf             4477662985899852751567---304--------7775267658417989999888998-860823489999999840
Q gi|254781017|r  150 DLAASIHGGLICYQMPKYSIEK---IDF--------IFPIHLIYSGYKTPTAQVLKKISYI-EIEYPEINEINQKIYALM  217 (324)
Q Consensus       150 D~~a~~~Gg~i~~~~~~~~~~~---~~~--------~~~l~l~~tg~~~~T~~~v~~v~~~-~~~~~~~~~~~~~~~~~~  217 (324)
                      ||+++++||++++++.+.....   +.+        ..++++++|+.+++|++++..+... ....+...+...    .+
T Consensus       160 D~~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~tg~~~~s~~~~~~~~~~~~~~~~~~~~~~~----~~  235 (357)
T 3k85_A          160 DQYAAAFGGFNYMEFLQNDLVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAAIINEQKKNTSEGNQTAIEAMH----KI  235 (357)
T ss_dssp             HHHHHHHCSEEEEEEETTTEEEEEEECCCHHHHHHHHHTEEEECC---------------------CCTTHHHH----HH
T ss_pred             CCHHHCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HH
T ss_conf             40645167621577405884377112320445555430332542475330776667888766430188998887----77


Q ss_pred             CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHH
Q ss_conf             332078898730486445689999989999861--678779999999999719945997268997548999846653268
Q gi|254781017|r  218 GKLSQISCQALRNKNLKVLAQAMNRQQGLLETL--GVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSL  295 (324)
Q Consensus       218 ~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~l--gvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~  295 (324)
                      .+++.++.++++++|++.|+++|+++|..+..+  ++|+|+++++++.+++ .|++|+|+||||||||+++|++++..  
T Consensus       236 ~~~~~~~~~a~~~~d~~~lg~lm~~~~~~~~~l~~~vs~~~ld~l~~~a~~-~Ga~gaKlsGAGgGG~~~~l~~~~~~--  312 (357)
T 3k85_A          236 KQSAIDTKLALLKGDVGEFARILGEGWENKKKMAGAITNPMIQEAFDVATG-AGAMAGKVSGAGGGGFIMFVVEPTRK--  312 (357)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC-----------CCSCTTTT-SCCSEEEECCCC---CEEEECCHHHH--
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-CCCEEEEEEEECHHHEEEEEECHHHH--
T ss_conf             666677787663026999999999999987764147998999999999976-89969999730610289999876459--


Q ss_pred             HHHHHHHHHHHCCCEEEEEECC
Q ss_conf             9999999999779789994145
Q gi|254781017|r  296 PYQSVNCHMHAKGIDIVPITPS  317 (324)
Q Consensus       296 ~~~~~~~~~~~~g~~~~~~~~~  317 (324)
                        +++.+++...|++.++.+.+
T Consensus       313 --~~~~~~l~~~~~~~~~~~~~  332 (357)
T 3k85_A          313 --EEVVRALNNLNGFVMPFQFI  332 (357)
T ss_dssp             --HHHHHHHHTSSSCBCCCCBC
T ss_pred             --HHHHHHHHHCCCEEEEEEEC
T ss_conf             --99999998779849999991