HHSEARCH alignment of GI: 254781017 and SCOP domain: d1k47a2

Alignment

Probab=99.84  E-value=2.2e-20  Score=145.30  Aligned_cols=128  Identities=16%  Similarity=0.178  Sum_probs=106.0

Q ss_pred             EECCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             30477752676584179899998889988608234899999998403320788987304864456899999899998616
Q gi|254781017|r  172 IDFIFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQGLLETLG  251 (324)
Q Consensus       172 ~~~~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~lg  251 (324)
                      .+++.+|+++|||.+++|+++++.|.+.+  +       +.++..+..+++++.++|+++|++.|+++|+++|.+|++++
T Consensus         2 ~~l~~~lll~~TG~~~sT~~lv~~v~~~~--~-------~~~l~~~~~~v~~~~~al~~~d~~~l~~~m~~~~~ll~~l~   72 (135)
T d1k47a2           2 PTLECDFLVGWTKEVAVSSHMVQQIKQNI--N-------QNFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLS   72 (135)
T ss_dssp             CCSCCEEEEEECCCCCCCHHHHHHHHTTC--C-------HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHH--H-------HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf             99986389984499354799999999997--7-------67999999999999999992877999999999999998635


Q ss_pred             --CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             --78779999999999719945997268997548999846653268999999999977978999
Q gi|254781017|r  252 --VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDIVP  313 (324)
Q Consensus       252 --vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~~~  313 (324)
                        +|+|+++++++.+. ..| .++|+||||||||+++|+++.   ...+.+.+.|.+.|++.+-
T Consensus        73 ~~i~~~~l~~l~~~a~-~~g-~~ak~~GaGgGG~~i~l~~~~---~~~~~i~~~~~~~Gi~~~~  131 (135)
T d1k47a2          73 TDIYTPLLRQLKEASQ-DLQ-AVAKSSGAGGGDCGIALSFDA---QSTKTLKNRWADLGIELLY  131 (135)
T ss_dssp             TTTSCHHHHHHHHTTT-TSS-EEEEECSSCSSSEEEEEECSH---HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCCHHHHHHHHHHH-HHC-CCHHCCCCCCCCEEEEEECCH---HHHHHHHHHHHHCCCHHHH
T ss_conf             5678807899999999-706-002014676788589986283---1499999999987987660

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Phosphomevalonate kinase (PMK)
domain: Phosphomevalonate kinase (PMK)
species: Streptococcus pneumoniae r6 [TaxId: 171101]