HHSEARCH alignment of GI: 254781017 and SCOP domain: d1s4ea1

Alignment
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00  E-value=2e-34  Score=234.19  Aligned_cols=166  Identities=22%  Similarity=0.219  Sum_probs=132.5

Q ss_pred             EEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCC----HHHCCCHHHHHHHHH-HHH
Q ss_conf             997170499974353308942898776772899999868984999953644446566----120150899999999-971
Q gi|254781017|r    9 CVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLD----LAMFHPSFSFIIMAI-NHI   83 (324)
Q Consensus         9 ~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~----~~~~~~~~~~i~~~l-~~~   83 (324)
                      +|||||||+|+|||+||+|++||++||+++++++++++++..+...+..........    ...|......+...+ +..
T Consensus         1 tv~aPgRi~l~GeH~Dy~gg~vl~~AI~~~~~v~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (176)
T d1s4ea1           1 TVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEG   80 (176)
T ss_dssp             CEEEEEEEESSCCSCGGGTCEECEEEEEEEEEEC----CCBCCCBTTTTC-C---CC-CCCCSSTHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEEECCCEEECCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCHHHEEHHHHHHHHHC
T ss_conf             92257899987168134898988588665899999816643788425775024651033235662021200123346631


Q ss_pred             CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHCCC---E
Q ss_conf             87787389998268753548874024566556777640456666014557888877652146887-5447766298---5
Q gi|254781017|r   84 KPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSG-IDLAASIHGG---L  159 (324)
Q Consensus        84 ~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG-~D~~a~~~Gg---~  159 (324)
                      ....|++|.++|+||.|+|||||||++||+++|++.+ ++.++++++++++|+.+|+.++|.+|| |||++++|||   +
T Consensus        81 ~~~~g~~i~i~s~iP~gsGLgSSAAl~va~~~al~~~-~~~~~~~~~l~~~a~~~E~~~~g~~~G~~Dq~~~~~gg~~~~  159 (176)
T d1s4ea1          81 YKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQL-YNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNV  159 (176)
T ss_dssp             CCCCCBC-CEEESSCTTSSSCHHHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTSCCCCCSHHHHHHHHCCTTEE
T ss_pred             CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEE
T ss_conf             5677848998357456766456078999999999998-523699899999999998876289865487999985688879


Q ss_pred             EEEEECCCEEEEEECC
Q ss_conf             8998527515673047
Q gi|254781017|r  160 ICYQMPKYSIEKIDFI  175 (324)
Q Consensus       160 i~~~~~~~~~~~~~~~  175 (324)
                      +++++++..++.+++|
T Consensus       160 ~~~d~~~~~~~~i~~P  175 (176)
T d1s4ea1         160 IFLDTQTLQYEYIPFP  175 (176)
T ss_dssp             EEEETTTTEEEEEECC
T ss_pred             EEEECCCCCEEECCCC
T ss_conf             9986799978866899


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]