HHSEARCH alignment of GI: 254781017 and SCOP domain: d1s4ea2

Alignment

Probab=99.81  E-value=3.8e-19  Score=137.48  Aligned_cols=100  Identities=19%  Similarity=0.171  Sum_probs=86.0

Q ss_pred             CCHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHH
Q ss_conf             207889873048644568999998999986-1678779999999999719945997268997548999846653268999
Q gi|254781017|r  220 LSQISCQALRNKNLKVLAQAMNRQQGLLET-LGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQ  298 (324)
Q Consensus       220 i~~~~~~al~~~d~~~l~~lm~~~~~~L~~-lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~  298 (324)
                      .+.++.+||+++|++.||++|+++|.+|++ +++|+|++|.+++.+.+ .|++|+||||+|||||+++|++.+..+.+++
T Consensus        67 Rv~~~~~al~~~d~~~~G~lm~~sh~sl~~~~evS~~eld~lv~~a~~-~Ga~GaRmtGgGfGG~viaLv~~~~~~~~~~  145 (171)
T d1s4ea2          67 RVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAME-LGAYGARLTGAGFGGSAIALVDKDKAKTIGD  145 (171)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-TTCSEEEECSSCSEEEEEEEEEGGGHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCCEEEECCCCCCEEEEEECHHHHHHHHH
T ss_conf             778899986415588999999999998988560588789999999864-3667425523899807999855777999999


Q ss_pred             HHHHHHHH-CCCE--EEEEECCCCC
Q ss_conf             99999997-7978--9994145456
Q gi|254781017|r  299 SVNCHMHA-KGID--IVPITPSHST  320 (324)
Q Consensus       299 ~~~~~~~~-~g~~--~~~~~~~~~~  320 (324)
                      .+.+.+.+ .|..  ++.+.|+.|.
T Consensus       146 ~i~~~y~~~~~~~~~~~~~~p~~Ga  170 (171)
T d1s4ea2         146 AILREYLAKFSWKAKYFVVKPSDGV  170 (171)
T ss_dssp             HHHHHHHHHCCSCCEEEEECBCCCC
T ss_pred             HHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             9999999851999877997468999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]