HHsearch alignment for GI: 254781018 and conserved domain: COG0083
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism].
Probab=99.90 E-value=1.6e-20 Score=148.13 Aligned_cols=264 Identities=19% Similarity=0.244 Sum_probs=183.7
Q ss_pred CCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 95489987667279999984898299995576667532100123333433211111221033477788899999875115
Q gi|254781018|r 30 GASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIAKKIPITSVLTHPNDLILYIFNRHL 109 (337)
Q Consensus 30 G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (337)
T Consensus 18 GFD~lGlAl~~~~~~~v~~~~~-~~~i~~~g~~~--------~~iP~~~~n-------~~--------~~~~~~~~~~~- 72 (299)
T COG0083 18 GFDVLGLALDLYNDVVVVEVVD-KFEIEVEGEGA--------DKIPLDPEN-------LV--------YQAALKFLEAL- 72 (299)
T ss_pred CCCCEEEECCCCCCEEEEEECC-CEEEEEECCCC--------CCCCCCCCE-------EH--------HHHHHHHHHHH-
T ss_conf 7000012014557279997047-37999834656--------679998300-------09--------99999999982-
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEE
Q ss_conf 66788769999805541038985303789999999998187754025899999986411577877345787653263024
Q gi|254781018|r 110 PHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQHGKTGIIDSTTIVMGGIIYI 189 (337)
Q Consensus 110 ~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~e~~~~~~~sg~D~~~~~~gg~~~~ 189 (337)
T Consensus 73 -~~~~~~~i~i~k~IP~~rGLGSSaAsiVAal~aan~l~~~~L~-~~~ll~~a~~~Eg------HpDNVapa~lGG~~l~ 144 (299)
T COG0083 73 -GIEAGVKIRIEKGIPLGRGLGSSAASIVAALAAANELAGLPLS-KEELLQLALEIEG------HPDNVAPAVLGGLVLV 144 (299)
T ss_pred -CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHCC------CCCHHHHHHHCCEEEE
T ss_conf -9986579999769987778758999999999999998459998-9999999997558------9710777760787998
Q ss_pred EC-CCCC--CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH--HHHH
Q ss_conf 02-7852--00147884399974971453799999999764120689998765489999998387216899999--9599
Q gi|254781018|r 190 NP-PQII--KNETLVGEWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNEMMENIQKKDAEKTYKSVR--VNQS 264 (337)
Q Consensus 190 ~~-~~~~--~~~~~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~--~~~~ 264 (337)
T Consensus 145 ~~~~~~~~~~v~~~~~~~~v~~iP~~e~sT~~aR~vLP~~~~~~daV~n~s~~-a~lv~al~~~~~~l~~~~~~D~ihep 223 (299)
T COG0083 145 EEESGIISVKVPFPSDLKLVVVIPNFEVSTAEARKVLPKSYSRKDAVFNLSRA-ALLVAALLEGDPELLRAMMKDVIHEP 223 (299)
T ss_pred EECCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHHCCCHHHHHHHHCCCCCHH
T ss_conf 61587347971587646899990896565799997465668889999999999-99999997699999998703601046
Q ss_pred HHHHCCCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCCEEEEEEEECCCHHHHHHH--------CCCEEEEEEECCCCEE
Q ss_conf 999718997799999999985798-0895078867885089999857997999974--------5986999998799709
Q gi|254781018|r 265 LLESIGVVPETVGKFIRCIENNGG-SAKIAGAGSIRGEKAGLVLVGGYNPEKLSSL--------YGYTCYKIKEDKNGTM 335 (337)
Q Consensus 265 ll~~l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~G~~ 335 (337)
T Consensus 224 yR~~L---~P~~~~v~~~a~~~gA~g~~lSGAGPT-----i~al~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 295 (299)
T COG0083 224 YRAKL---VPGYAEVREAALEAGALGATLSGAGPT-----VFALADESDAEKAAALLEELYEQGIKGRVHILALDSDGAR 295 (299)
T ss_pred HHHHH---CCCHHHHHHHHHHCCCEEEEEECCCCE-----EEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCE
T ss_conf 66532---701899999986479659999647870-----7998454206679999999997288506999721588616