HHsearch alignment for GI: 254781018 and conserved domain: COG0153
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism].
Probab=100.00 E-value=0 Score=312.23 Aligned_cols=300 Identities=17% Similarity=0.176 Sum_probs=217.6
Q ss_pred CCCC-CCCCEEEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4357-996089985817999744544079548998766727999998489829999557666753210012333343321
Q gi|254781018|r 3 QQTS-QTPHAHSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHR 81 (337)
Q Consensus 3 ~~~~-~~p~~~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 81 (337)
T Consensus 15 ~~f~~~~~~~~~~aPGRvNLIGEHtDYn~G~VlP~Ain~~t~v~v~~r~d~~v~l~s~n~~~~~~~~~-----------~ 83 (390)
T COG0153 15 EHFGYVEPTVTAFAPGRVNLIGEHTDYNGGFVLPCAINYGTYVAVAKRDDGKVRLYSANFGNAGDIFF-----------L 83 (390)
T ss_pred HHHCCCCCCEEECCCCEEEEECCCEECCCCEEEEEEEECCEEEEEEECCCCEEEEEECCCCCCCCEEE-----------C
T ss_conf 98621376457617855886012221268667888960542899997368559999678763342430-----------4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 11112210334777888999998751156678876999980554103898530378999999999818775402589999
Q gi|254781018|r 82 DFIAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAE 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~ 161 (337)
T Consensus 84 ~~d~~~~~~~~W~nYvkgvi~~l~~~g--~~~~G~~i~i~gnIP~GaGLSSSAAleva~~~al~~l~~~~~~-k~~la~i 160 (390)
T COG0153 84 LLDIAKEKIDDWANYVKGVIKALQKRG--YAFTGLDIVISGNIPIGAGLSSSAALEVAVALALQRLFNLPLD-KAELAKI 160 (390)
T ss_pred CHHHCCCCCCHHHHHHHHHHHHHHHCC--CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHHH
T ss_conf 433144531103324789999998658--7767705999667888888672689999999999997389998-8899999
Q ss_pred HHHHH-HCCCCCCCCHHHHHHHHCC---CEEEECCCC--CCCCCCCC--CEEEEECCCCCCCHHHHHHHHH---------
Q ss_conf 99864-1157787734578765326---302402785--20014788--4399974971453799999999---------
Q gi|254781018|r 162 TGYIE-RLQHGKTGIIDSTTIVMGG---IIYINPPQI--IKNETLVG--EWWAINTGMPESSTGECVSFVE--------- 224 (337)
Q Consensus 162 a~~~e-~~~~~~~sg~D~~~~~~gg---~~~~~~~~~--~~~~~~~~--~~~~i~~~~~~~st~~~~~~~~--------- 224 (337)
T Consensus 161 ~q~AEn~fvGvn~G~mDQ~~s~~G~~~~al~ld~~~l~~~~~~~p~~~~~ivI~ns~vkr~la~seYn~Rr~ece~A~~~ 240 (390)
T COG0153 161 AQVAENQFVGVNCGIMDQLASAFGKKDHALLLDCRTLEYEPVPFPVGGVSIVIVNSNVKRELADSEYNERRAECEEAAEF 240 (390)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99987513477675088999986877848999736662687304766459999637976654234789999999999999
Q ss_pred --H------------------HHC-------CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHCCCCCHHH
Q ss_conf --7------------------641-------2068999876548999999838721689999995999-99718997799
Q gi|254781018|r 225 --Q------------------HFS-------QSSIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSL-LESIGVVPETV 276 (337)
Q Consensus 225 --~------------------~~~-------~~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~l-l~~l~vs~~~l 276 (337)
T Consensus 241 l~~~~~~L~d~~~~~~~~~~~~i~~~~~~~rRa~hvv~En~Rvl~a~~Al~~~dl~~fG~Lm~~SH~slrddyevt~pEl 320 (390)
T COG0153 241 LGVSIKSLRDVTDEEFAALQAEIEVDPKIARRARHVVTENQRVLEAAKALRSGDLTEFGELMNESHESLRDDYEVTCPEL 320 (390)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 98755035433799999645241446688899999986777899999998718899999999998998874356656628
Q ss_pred HHHHHHHHHC-C-CEEEECCCCCCCCCEEEEEEEECCCHHHHHHH
Q ss_conf 9999999857-9-80895078867885089999857997999974
Q gi|254781018|r 277 GKFIRCIENN-G-GSAKIAGAGSIRGEKAGLVLVGGYNPEKLSSL 319 (337)
Q Consensus 277 ~~l~~~~~~~-g-~~ak~sGAG~~~Gg~~~~~l~~~~~~~~~~~~ 319 (337)
T Consensus 321 D~lve~a~~~~G~~GaRmTGaG---fGGc~IaLv~~~~v~~~~e~ 362 (390)
T COG0153 321 DTLVEIALAAGGAYGARMTGAG---FGGCVIALVPNDDVEAVAEA 362 (390)
T ss_pred HHHHHHHHHCCCCCCCEECCCC---CCCEEEEEECHHHHHHHHHH
T ss_conf 9999999872786501203788---78559999322027999999