HHsearch alignment for GI: 254781018 and conserved domain: COG1829
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only].
Probab=99.27 E-value=1.4e-08 Score=72.79 Aligned_cols=262 Identities=18% Similarity=0.191 Sum_probs=156.4
Q ss_pred EEEECCCEEEEE-----CCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 899858179997-----445440795489987667279999984898299995576667532100123333433211111
Q gi|254781018|r 11 AHSIAPAKVILS-----GEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIA 85 (337)
Q Consensus 11 ~~~~APGKi~L~-----GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T Consensus 3 ~~~fvP~hITgfF~pv~~~~p~~SGSiGaGv~l~~gv~v~v~~~~~~~v~~-Ng~~--------------~d~~------ 61 (283)
T COG1829 3 VRLFVPGHITGFFVPVIGKDPLKSGSIGAGVALERGVTVEVRFGEGTGVRL-NGKK--------------IDLP------ 61 (283)
T ss_pred CEEECCCEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEE-CCEE--------------CCCH------
T ss_conf 148526426898885248997667886423796386269999658735888-9963--------------1302------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 22103347778889999987511566788769999805541038985303789999999998187754025899999986
Q gi|254781018|r 86 KKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYI 165 (337)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~ 165 (337)
T Consensus 62 ---~-----------~~~v~e~---L~~~~~~v~~~~~~P~G~G~G~Sga~AL~~Ala~a~~~~~~---~~~a~~~AH~a 121 (283)
T COG1829 62 ---I-----------TRKVIEK---LGPDGVGVRIESPVPLGCGYGVSGAGALGTALALAEELGLG---EESAARIAHVA 121 (283)
T ss_pred ---H-----------HHHHHHH---HCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHH
T ss_conf ---6-----------9999998---47668626998517988654144799999999988664998---78999988899
Q ss_pred HHCCCCCCCCHHHHHHHHCCCE-EEECC--CCCCCCCCCCC-EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 4115778773457876532630-24027--85200147884-39997497145379999999976412068999876548
Q gi|254781018|r 166 ERLQHGKTGIIDSTTIVMGGII-YINPP--QIIKNETLVGE-WWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTN 241 (337)
Q Consensus 166 e~~~~~~~sg~D~~~~~~gg~~-~~~~~--~~~~~~~~~~~-~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (337)
T Consensus 122 EV~~--gtGLGDVvAq~~GGlViR~~pG~Pg~~~vd~Ip~~~~~V~~~~~g~l~T~~vi~~~--------~~~~i~~~g~ 191 (283)
T COG1829 122 EVEN--GTGLGDVVAQYTGGLVIRVKPGGPGEGEVDRIPVPGLRVITISLGELSTKSVITDE--------VVRKINEAGK 191 (283)
T ss_pred HHHC--CCCCHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHH--------HHHHHHHHHH
T ss_conf 9871--78704788875085799831899985789886048826999973666677763067--------8999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC---EEEECCCCCCCCCEEEEEEEECCCH-HHHH
Q ss_conf 99999983872168999999599999718997799999999985798---0895078867885089999857997-9999
Q gi|254781018|r 242 EMMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGG---SAKIAGAGSIRGEKAGLVLVGGYNP-EKLS 317 (337)
Q Consensus 242 ~~~~al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~~~~~g~---~ak~sGAG~~~Gg~~~~~l~~~~~~-~~~~ 317 (337)
T Consensus 192 ~~l~ellk~--Ptle~f~~~a~~FA~~~Gl~~~~v~~~~~~~~~~g~l~as~~mlg-------~tVFa~~~~~e~~~~~~ 262 (283)
T COG1829 192 RALAELLKN--PTLENFMEEAREFARRTGLMSEEVKEAAEALHSVGGLGASMAMLG-------VTVFALSPEAERLAEVG 262 (283)
T ss_pred HHHHHHHHC--CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHC-------CEEEEECCCCCHHHHHH
T ss_conf 999998839--999999999999998728678899999987543474457678638-------68999623431077887
Q ss_pred HHCCCEEEEEEECCCC
Q ss_conf 7459869999987997
Q gi|254781018|r 318 SLYGYTCYKIKEDKNG 333 (337)
Q Consensus 318 ~~~~~~~~~~~~~~~G 333 (337)
T Consensus 263 ~-~~~~~~~~~l~~~g 277 (283)
T COG1829 263 K-DLGAPYDIRLIYGG 277 (283)
T ss_pred H-HHCCCCCEEEEECC
T ss_conf 7-51466332688447