HHsearch alignment for GI: 254781018 and conserved domain: COG1907
>COG1907 Predicted archaeal sugar kinases [General function prediction only].
Probab=98.98 E-value=1.1e-06 Score=60.78 Aligned_cols=272 Identities=17% Similarity=0.186 Sum_probs=159.1
Q ss_pred EEEECCCEEEE-----ECCCEEECCCEEEEEEECC-CEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89985817999-----7445440795489987667-27999998489829999557666753210012333343321111
Q gi|254781018|r 11 AHSIAPAKVIL-----SGEYSSLYGASALAVAITF-YLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFI 84 (337)
Q Consensus 11 ~~~~APGKi~L-----~GEh~v~~G~~ai~~aI~~-~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T Consensus 2 v~v~tpSrlH~gliDl~G~~GRv~GgvG~a--Le~P~l~i~~~~s~~~~~--~ge------------------~----~- 54 (312)
T COG1907 2 VRVRTPSRLHAGLIDLNGSIGRVDGGVGLA--LEEPRLEIEAKPSDDIEV--DGE------------------D----R- 54 (312)
T ss_pred EEEECCCEEEECCCCCCCCCCCEECCEEEE--EECCCEEEEEECCCCCCC--CCH------------------H----H-
T ss_conf 587047501100445787532130440488--507815999720554112--550------------------6----6-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 12210334777888999998751156678876999980554103898530378999999999818775402589999998
Q gi|254781018|r 85 AKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGY 164 (337)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~ 164 (337)
T Consensus 55 ------~~~~~~~---a-----~~~le~~~gv~I~I~~~~P~HvGLGS~TQlaLa~a~ai~~i~gl~~~~-~e---lA~~ 116 (312)
T COG1907 55 ------RERVEKA---A-----RLVLEVGEGVKIEIRSDIPAHVGLGSTTQLALAVASAILEIYGLELSI-RE---LAFA 116 (312)
T ss_pred ------HHHHHHH---H-----HHHHCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCH-HH---HHHH
T ss_conf ------8999999---9-----975141675299997527322077737799999999999986589998-99---9999
Q ss_pred HHHCCCCCCCCHHHHHHHHCCCEE-----EE--CCCC---CCCCCCCCCEEEEE-CCC--CCCCHHHHHHHHHH-HHCCC
Q ss_conf 641157787734578765326302-----40--2785---20014788439997-497--14537999999997-64120
Q gi|254781018|r 165 IERLQHGKTGIIDSTTIVMGGIIY-----IN--PPQI---IKNETLVGEWWAIN-TGM--PESSTGECVSFVEQ-HFSQS 230 (337)
Q Consensus 165 ~e~~~~~~~sg~D~~~~~~gg~~~-----~~--~~~~---~~~~~~~~~~~~i~-~~~--~~~st~~~~~~~~~-~~~~~ 230 (337)
T Consensus 117 vgR---G~tSgiGv~afe~GGFIVDGGh~~~f~ps~~sP~I~R~dfPedW~~VlaIP~~~rg~~~~~E~~if~~~~p~p~ 193 (312)
T COG1907 117 VGR---GGTSGIGVYAFEYGGFIVDGGHSFGFLPSSASPLIFRLDFPEDWRFVLAIPEVERGVSGRREVDIFKKYCPVPL 193 (312)
T ss_pred HCC---CCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCH
T ss_conf 736---77564137998878899878744676668999605532288865999994478843210278889975689997
Q ss_pred HHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHH----HHC--CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEE
Q ss_conf 6899987654-89999998387216899999959999----971--8997799999999985798089507886788508
Q gi|254781018|r 231 SIWSEFNAVT-NEMMENIQKKDAEKTYKSVRVNQSLL----ESI--GVVPETVGKFIRCIENNGGSAKIAGAGSIRGEKA 303 (337)
Q Consensus 231 ~~~~~~~~i~-~~~~~al~~~d~~~l~~~~~~~~~ll----~~l--~vs~~~l~~l~~~~~~~g~~ak~sGAG~~~Gg~~ 303 (337)
T Consensus 194 ~~~~~ls~~vLm~mmPavvE~Die~fg~~l~~iQ~l~g~~f~~~e~~~~~~~V~~iv~~m~~~a~~agqSSwGP------ 267 (312)
T COG1907 194 EEVGELSHRVLMKMMPAVVERDIESFGEALNEIQELGGKWFKKVEGGLQREDVKEIVDEMVEAAYGAGQSSWGP------ 267 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHCCCCCCCCCCC------
T ss_conf 99989999999987589886379999999999998876646564131022899999999987230443256688------
Q ss_pred EEEEEECCCHH-------HHHHH----CCCEEEEEEECCCCEEEC
Q ss_conf 99998579979-------99974----598699999879970929
Q gi|254781018|r 304 GLVLVGGYNPE-------KLSSL----YGYTCYKIKEDKNGTMLA 337 (337)
Q Consensus 304 ~~~l~~~~~~~-------~~~~~----~~~~~~~~~~~~~G~~i~ 337 (337)
T Consensus 268 -tvY~i~d~~~~~~~~~~~~~~~~~~g~~gev~vT~~rN~Ga~i~ 311 (312)
T COG1907 268 -TVYGIVDSREAGSVVRKLIDILLEEGIGGEVFVTKARNRGAEIL 311 (312)
T ss_pred -EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEC
T ss_conf -78986165321247999999987438861899952677776521