HHsearch alignment for GI: 254781018 and conserved domain: COG2605
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only].
Probab=100.00 E-value=3.6e-37 Score=252.91 Aligned_cols=296 Identities=21% Similarity=0.218 Sum_probs=222.9
Q ss_pred EEEECCCEEEEECCCEEE------CCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 899858179997445440------79548998766727999998489829999557666753210012333343321111
Q gi|254781018|r 11 AHSIAPAKVILSGEYSSL------YGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFI 84 (337)
Q Consensus 11 ~~~~APGKi~L~GEh~v~------~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T Consensus 2 ii~raPLRItfgGGGTDvepy~~k~GGaVlnatIdky~y~~i~~~~d~~I~~~~~~~---------------~~v~~~~~ 66 (333)
T COG2605 2 IISRAPLRITFGGGGTDVEPYCSKHGGAVLNATIDKYIYVTIEKGFDDEIRVRYDRT---------------EFVKSYLE 66 (333)
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEEEEEEEEEEECCCCCCEEEEECCHH---------------HHHHHHHH
T ss_conf 302055389852787676077875387777755310799997168885389952357---------------76512676
Q ss_pred CCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCC--EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 122-1033477788899999875115667887--6999980554103898530378999999999818775402589999
Q gi|254781018|r 85 AKK-IPITSVLTHPNDLILYIFNRHLPHISCG--ISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAE 161 (337)
Q Consensus 85 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~ 161 (337)
T Consensus 67 ~~h~~~~~~~l-------~r~~----l~~~g~~~~el~~~~D~P~GSGLGSSSa~vvaLl~a~~~~kg~~~~-~~~LA~e 134 (333)
T COG2605 67 NEHKPLVVESL-------KRDF----LEFNGGTPIELHTQSDAPPGSGLGSSSAFVVALLNALHAWKGESLG-PYELARE 134 (333)
T ss_pred HCCCHHHHHHH-------HHHH----HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHHH
T ss_conf 53761899999-------9998----7314997469998437899998773479999999999998578789-8999999
Q ss_pred HHHHHHCCCCCCCC-HHHHHHHHCCCEEEECCCCC--CCCC----------CCCCEEEEECCCCCCCHHHHHHHHHHHHC
Q ss_conf 99864115778773-45787653263024027852--0014----------78843999749714537999999997641
Q gi|254781018|r 162 TGYIERLQHGKTGI-IDSTTIVMGGIIYINPPQII--KNET----------LVGEWWAINTGMPESSTGECVSFVEQHFS 228 (337)
Q Consensus 162 a~~~e~~~~~~~sg-~D~~~~~~gg~~~~~~~~~~--~~~~----------~~~~~~~i~~~~~~~st~~~~~~~~~~~~ 228 (337)
T Consensus 135 Ay~IER~~l~~~gG~QDqYaaA~GGFnfMEf~~~~~V~v~pL~i~~e~~~Ele~~~lL~yTGi~R~Ss~V~~dQ~~~~~~ 214 (333)
T COG2605 135 AYEIEREDLKIVGGKQDQYAAAFGGFNFMEFRGNGEVVVNPLRINRERTAELEARLLLYYTGITRQSSEVIEDQVRNVVD 214 (333)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 99988998545466623789984792179974898389800334466899987406998816402255889999987631
Q ss_pred C----CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCC
Q ss_conf 2----0689998765489999998387216899999959999971--8997799999999985798-0895078867885
Q gi|254781018|r 229 Q----SSIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLESI--GVVPETVGKFIRCIENNGG-SAKIAGAGSIRGE 301 (337)
Q Consensus 229 ~----~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~l--~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg 301 (337)
T Consensus 215 ~~~~~~e~~~~mk~~A~~~~~al~~nd~~~f~~~l~~gW~~KK~ls~~ISN~~IDriy~~A~~~GA~~gKl~GaG~--gG 292 (333)
T COG2605 215 GDEETLEALHEMKALAYEMKDALVRNDIPEFGQILDRGWEAKKKLSSRISNDAIDRIYELALKNGAYGGKLSGAGG--GG 292 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCEEECCCC--CC
T ss_conf 5188999999999999999999986335779999976777645533576747789999999866732222302688--62
Q ss_pred EEEEEEEECCCHHH-HHHHC--CCEEEEEEECCCCEEE
Q ss_conf 08999985799799-99745--9869999987997092
Q gi|254781018|r 302 KAGLVLVGGYNPEK-LSSLY--GYTCYKIKEDKNGTML 336 (337)
Q Consensus 302 ~~~~~l~~~~~~~~-~~~~~--~~~~~~~~~~~~G~~i 336 (337)
T Consensus 293 Fl-lf~~~p~k~~~l~r~l~~~~~~~~~~~Fd~~Gsr~ 329 (333)
T COG2605 293 FL-LFFCDPSKRNELARALEKEQGFVVDTSFDKEGSRI 329 (333)
T ss_pred EE-EEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEEE
T ss_conf 79-99968542489999999844973787764787079