HHsearch alignment for GI: 254781018 and conserved domain: COG3890
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism].
Probab=99.85 E-value=1.1e-17 Score=130.13 Aligned_cols=295 Identities=18% Similarity=0.156 Sum_probs=159.3
Q ss_pred EEEECCCEEEEECCCEEEC-CCEEEEEEECCCEEEEEEECCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8998581799974454407-95489987667279999984898-299995576667532100123333433211111221
Q gi|254781018|r 11 AHSIAPAKVILSGEYSSLY-GASALAVAITFYLRALLTTIEPS-LIRIINSQTIEYSFEACRLLGHQIDQRHRDFIAKKI 88 (337)
Q Consensus 11 ~~~~APGKi~L~GEh~v~~-G~~ai~~aI~~~~~v~i~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T Consensus 4 ~~fSaPGk~LlaGdYs~lv~glsahaia~nkr~~cs~vrvKskdswlfhisi~g~--------------~kns-f--iEl 66 (337)
T COG3890 4 ISFSAPGKLLLAGDYSILVEGLSAHAIAINKRAFCSFVRVKSKDSWLFHISIKGI--------------DKNS-F--IEL 66 (337)
T ss_pred EEECCCCCEEEECCCEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEEEEECCC--------------CCCH-H--HHH
T ss_conf 4405887369840311355233124787305552013674267458987330136--------------8871-8--999
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE------ECC----CCCCCCCCCCHHHHHHHHHHHH-HH-HCCCCCCHH
Q ss_conf 03347778889999987511566788769999------805----5410389853037899999999-98-187754025
Q gi|254781018|r 89 PITSVLTHPNDLILYIFNRHLPHISCGISLDL------HST----IPIGSGFGSSSAIISALSLALS-SI-THQPFCNKE 156 (337)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i------~s~----iP~~~GLGSSaA~~va~~~al~-~~-~~~~~~~~~ 156 (337)
T Consensus 67 ~~----~~Vf~----yF~~~~~~c~qnlev~~ddayy~q~~f~~d~g~KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~ 138 (337)
T COG3890 67 RS----DFVFK----YFAYLSQNCFQNLEVFADDAYYDQSNFFFDDGTKTGLGSSAAVATSLTCGLFLSHANATNVDEKG 138 (337)
T ss_pred HH----HHHHH----HHHHHHHHCCCCCEEECCHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99----99999----98754142233322323232105632221477657776246889999999999886056501678
Q ss_pred HHHHHHHHHHHCCC-CCCCCHHHHHHHHCCCEEEECCCC--CCC---CC--CCCCEEEEECCCCCCCHHHHHHHHHHHHC
Q ss_conf 89999998641157-787734578765326302402785--200---14--78843999749714537999999997641
Q gi|254781018|r 157 KLIAETGYIERLQH-GKTGIIDSTTIVMGGIIYINPPQI--IKN---ET--LVGEWWAINTGMPESSTGECVSFVEQHFS 228 (337)
Q Consensus 157 ~~~~~a~~~e~~~~-~~~sg~D~~~~~~gg~~~~~~~~~--~~~---~~--~~~~~~~i~~~~~~~st~~~~~~~~~~~~ 228 (337)
T Consensus 139 eIhklaqiAhc~aQggIGSGfDiaaA~fGsiiyrRF~p~li~~l~qig~~nfg~y~LmmGd~a~gSeTvglV~kv~~w~n 218 (337)
T COG3890 139 EIHKLAQIAHCYAQGGIGSGFDIAAAIFGSIIYRRFEPGLIPKLRQIGAVNFGDYYLMMGDQAIGSETVGLVCKVNKWRN 218 (337)
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999889971797764035676623157863483100345763750306765662232368553489999987763
Q ss_pred CC--HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC------CCCCHHHHHHH-HHHHHCCC-EEEECCCCCC
Q ss_conf 20--689998765489999998387216899999959999971------89977999999-99985798-0895078867
Q gi|254781018|r 229 QS--SIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLESI------GVVPETVGKFI-RCIENNGG-SAKIAGAGSI 298 (337)
Q Consensus 229 ~~--~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~l------~vs~~~l~~l~-~~~~~~g~-~ak~sGAG~~ 298 (337)
T Consensus 219 s~~peelkc~de~nsrvl~l~~~-sLdE~~s~~~~irrslrritee~~adiep~kqt~~Ld~i~~l~gvl~~lipgaG-- 295 (337)
T COG3890 219 SILPEELKCNDEMNSRVLNLIKL-SLDESNSKSKAIRRSLRRITEEGLADIEPIKQTAALDSIFDLLGVLCDLIPGAG-- 295 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCC--
T ss_conf 37858877678888999988862-088899999999999999999752333341135540067760275475024678--
Q ss_pred CCCEEEEEEEECCCHHHHHHH--CCCEEEEEEECCCCEEE
Q ss_conf 885089999857997999974--59869999987997092
Q gi|254781018|r 299 RGEKAGLVLVGGYNPEKLSSL--YGYTCYKIKEDKNGTML 336 (337)
Q Consensus 299 ~Gg~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~G~~i 336 (337)
T Consensus 296 -ggdaif~l~~-~~~e~re~w~~~gi~i~dv~-adeGlr~ 332 (337)
T COG3890 296 -GGDAIFLLYR-PNIEAREAWLSKGISIVDVN-ADEGLRF 332 (337)
T ss_pred -CCCEEEEEEC-CCHHHHHHHHHCCEEEEECC-CCCCCCC
T ss_conf -8753799845-62898887875780799714-4436112