HHsearch alignment for GI: 254781018 and conserved domain: PRK00555
>PRK00555 galactokinase; Provisional.
Probab=100.00 E-value=0 Score=318.64 Aligned_cols=288 Identities=15% Similarity=0.120 Sum_probs=210.3
Q ss_pred EEEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 89985817999744544079548998766727999998489829999557666753210012333343321111122103
Q gi|254781018|r 11 AHSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIAKKIPI 90 (337)
Q Consensus 11 ~~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (337)
T Consensus 3 ~~~sAPGRVnliGEH~DY~gG~VLp~AI~~~~~v~~~~~~~~~i~~~s~~~~~~~----~~~---~~-------~~~~~~ 68 (363)
T PRK00555 3 VSYAAPGRINLIGEHTDYNLGFALPIALPQRTVVTFTPEHTGAITARSDRADGSV----RIP---LD-------TTPGQV 68 (363)
T ss_pred EEEECCCCEEEEECCEEECCCEEEEEEHHHCEEEEEEECCCCEEEEEECCCCCCE----EEE---CC-------CCCCCC
T ss_conf 6997666589762875789974694782012899999889986999976889867----986---77-------687766
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 34777888999998751156678876999980554103898530378999999999818775402589999998641157
Q gi|254781018|r 91 TSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQH 170 (337)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~e~~~~ 170 (337)
T Consensus 69 ~~W~~y~~gv~~~l~~--~g~~~~g~~~~I~s~IP~gaGLSSSAAl~va~~~al~~~~~~~~~-~~ela~la~~aE~~~~ 145 (363)
T PRK00555 69 TGWAAYAAGVIWALRG--AGHPVPGGAMSITSDVEIGSGLSSSAALECAVLGAVGAATGTRID-RLEQARLAQRAENDYV 145 (363)
T ss_pred CCHHHHHHHHHHHHHH--HCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHCC
T ss_conf 2278999999999997--189988852899778887667441899999999999997089999-9999999999997517
Q ss_pred CCCCC-HHHHHHHHCCC---EEEECCC--CCCCCCCCC----CEEEEECCCCCCCHHHHHHHHHH---------------
Q ss_conf 78773-45787653263---0240278--520014788----43999749714537999999997---------------
Q gi|254781018|r 171 GKTGI-IDSTTIVMGGI---IYINPPQ--IIKNETLVG----EWWAINTGMPESSTGECVSFVEQ--------------- 225 (337)
Q Consensus 171 ~~~sg-~D~~~~~~gg~---~~~~~~~--~~~~~~~~~----~~~~i~~~~~~~st~~~~~~~~~--------------- 225 (337)
T Consensus 146 G~~~GiMDQ~as~~g~~g~al~id~~~l~~~~v~~~~~~~~~~~vi~dS~~~~~~~~~~y~~R~~ec~~aa~~l~~~~lr 225 (363)
T PRK00555 146 GAPTGLLDQLAALFGAPKTALLIDFRDLTVRPVAFDPDACGVVLLLMDSRARHRHAGGEYAARRASCERAAADLGVSSLR 225 (363)
T ss_pred CCCCCCHHHHHHHCCCCCEEEEECCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 88875054788862788839873267885321444777677699997667644345323589999999999985912354
Q ss_pred ------------H-----HCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHCC
Q ss_conf ------------6-----412068999876548999999838721689999995999-9971899779999999998579
Q gi|254781018|r 226 ------------H-----FSQSSIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSL-LESIGVVPETVGKFIRCIENNG 287 (337)
Q Consensus 226 ------------~-----~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~l-l~~l~vs~~~l~~l~~~~~~~g 287 (337)
T Consensus 226 ~~~~~~l~~l~~~~~~~~~~Ra~hv~~E~~RV~~~~~al~~~d~~~~G~Lm~~SH~Slrd~yevS~~elD~lv~~a~~~G 305 (363)
T PRK00555 226 AVQDRGLAALGAIADPIDARRARHVLTENQRVLDFVAALADSDFTAAGQILTASHASMRDDFAITTERIDLIADSAVRAG 305 (363)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf 42076899987505888888888888888899999999873999999999999999999865179687999999999769
Q ss_pred C-EEEECCCCCCCCCEEEEEEEECCCHHHHHH
Q ss_conf 8-089507886788508999985799799997
Q gi|254781018|r 288 G-SAKIAGAGSIRGEKAGLVLVGGYNPEKLSS 318 (337)
Q Consensus 288 ~-~ak~sGAG~~~Gg~~~~~l~~~~~~~~~~~ 318 (337)
T Consensus 306 a~GARltGaG---fGGc~vaLv~~~~~~~~~~ 334 (363)
T PRK00555 306 ALGARMTGGG---FGGCVIALVPADRARDVAD 334 (363)
T ss_pred CCEEEEECCC---CCEEEEEEECHHHHHHHHH
T ss_conf 9278897378---8748999966878999999