HHsearch alignment for GI: 254781018 and conserved domain: PRK04344
>PRK04344 consensus.
Probab=99.88 E-value=2.6e-20 Score=146.76 Aligned_cols=241 Identities=19% Similarity=0.205 Sum_probs=165.0
Q ss_pred CEEEECCCEEEEE----CCCEE-ECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0899858179997----44544-079548998766727999998489829999557666753210012333343321111
Q gi|254781018|r 10 HAHSIAPAKVILS----GEYSS-LYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFI 84 (337)
Q Consensus 10 ~~~~~APGKi~L~----GEh~v-~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T Consensus 2 ~i~~kapAKINL~L~V~~kr~dGyH~l~s~~~~i~l~D~i~i~~~~~~~i~i~~~~~~--------~---p~~~------ 64 (284)
T PRK04344 2 KIYEKAPAKINLSLDTLFKRDDGYHEVEMIMTTIDLADRLTLEELKEDKIVVDSENRF--------V---PSDQ------ 64 (284)
T ss_pred CEEEEECEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEECCCC--------C---CCCC------
T ss_conf 0516712128533322775899982268999995688299999988998899978876--------8---8876------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 12210334777888999998751156678876999980554103898530378999999999818775402589999998
Q gi|254781018|r 85 AKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGY 164 (337)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~ 164 (337)
T Consensus 65 --~Nlv~ka--------~~~l~~-~~~~~~~~~I~l~KnIPvgaGLGGGSSdAAa~L~~Ln~l~~l~ls~-~~L~~la~~ 132 (284)
T PRK04344 65 --RNLAYQA--------AKLLKE-RYNIKKGVTISIDKHIPVAAGLAGGSSDAAATLRGLNRLWNLGLSL-EELAELGSE 132 (284)
T ss_pred --CHHHHHH--------HHHHHH-HHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHHH
T ss_conf --2199999--------999999-7598997699999789886788986157999999999985689999-999999986
Q ss_pred HHHCCCCCCCCHHHHHHHHCCCEEEECC-C-CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 6411577877345787653263024027-8-5200147884399974971453799999999764120689998765489
Q gi|254781018|r 165 IERLQHGKTGIIDSTTIVMGGIIYINPP-Q-IIKNETLVGEWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNE 242 (337)
Q Consensus 165 ~e~~~~~~~sg~D~~~~~~gg~~~~~~~-~-~~~~~~~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~ 242 (337)
T Consensus 133 l---------GaDVPffl~g~~a~~~G~Ge~l~~l~~~~~~~~vlv~P~~~vST~~vy~~~~~~~~~~~~-------~~~ 196 (284)
T PRK04344 133 I---------GSDVPFCVYGGTALATGRGEKIEPLPTPPSCWVVLAKPNIGVSTPDIFKNLNLDRIEHPD-------TDK 196 (284)
T ss_pred C---------CCCEEEEEECCCEEEECCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCC-------HHH
T ss_conf 2---------798648982761899858965079987787589998899996739999745800046877-------789
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHCCC-EEEECCCCCC
Q ss_conf 9999983872168999999599999718-997799999999985798-0895078867
Q gi|254781018|r 243 MMENIQKKDAEKTYKSVRVNQSLLESIG-VVPETVGKFIRCIENNGG-SAKIAGAGSI 298 (337)
Q Consensus 243 ~~~al~~~d~~~l~~~~~~~~~ll~~l~-vs~~~l~~l~~~~~~~g~-~ak~sGAG~~ 298 (337)
T Consensus 197 ~~~~~~~~~~~~~~~~~~-N--dle~~~~~~~P~i~~i~~~l~~~Ga~~~~mSGSGst 251 (284)
T PRK04344 197 MVEAIENGDYQQICQSLG-N--VLEPVTLAKHPEIAKIKNRMLKFGADAALMSGSGPT 251 (284)
T ss_pred HHHHHHCCCHHHHHHHCC-C--CHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 999886279999997734-8--568999985939999999999679986899772512