HHsearch alignment for GI: 254781018 and conserved domain: PRK04648

>PRK04648 consensus.
Probab=99.76  E-value=2.8e-16  Score=121.32  Aligned_cols=232  Identities=14%  Similarity=0.102  Sum_probs=149.3

Q ss_pred             CEEE-ECCCEEEEE----CCCEE-ECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             0899-858179997----44544-07954899876672799999848982999955766675321001233334332111
Q gi|254781018|r   10 HAHS-IAPAKVILS----GEYSS-LYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDF   83 (337)
Q Consensus        10 ~~~~-~APGKi~L~----GEh~v-~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~   83 (337)
T Consensus        13 ~~~~~~APAKINL~L~V~gkr~DGYH~l~Sl~~~idl~D~l~i~~~~~~~~~~~~~~~~~-------i----~~~-----   76 (295)
T PRK04648         13 DWSAWPAPAKLNLFLQITGRRADGYHLLQTVFRLLDWGDTIHLRVRSDGQIHRIGESLPG-------V----AED-----   76 (295)
T ss_pred             CEEECCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCCC-------C----CCC-----
T ss_conf             830445621370251328879999872568999837880999998899947993688888-------9----997-----


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             11221033477788899999875115667887699998055410389853037899999999981877540258999999
Q gi|254781018|r   84 IAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETG  163 (337)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~  163 (337)
T Consensus        77 ---~Nlv~ka--------~~~l-~~~~~~~~~~~I~l~K~IPvgAGLGGGSSnAAa~L~~Ln~~~~l~ls~-~~L~~ia~  143 (295)
T PRK04648         77 ---DDLVVRA--------ARLL-QSAAGTALGAEIRVDKRIPAGGGFGGGSSDAATVLVALNALWGLGLDV-DTLAELGL  143 (295)
T ss_pred             ---CHHHHHH--------HHHH-HHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHH
T ss_conf             ---7499999--------9999-996599987499998068667567765468999999999985899998-99999999


Q ss_pred             HHHHCCCCCCCCHHHHHHHHCCCEEEEC-CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             8641157787734578765326302402-785200147884399974971453799999999764120689998765489
Q gi|254781018|r  164 YIERLQHGKTGIIDSTTIVMGGIIYINP-PQIIKNETLVGEWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNE  242 (337)
Q Consensus       164 ~~e~~~~~~~sg~D~~~~~~gg~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~  242 (337)
T Consensus       144 ~l---------GaDVPffl~~~~a~~~G~GE~l~~~~~~~~~~lLv~P~~~vST~~vy~~~~~~~~~--~~~~~---~~~  209 (295)
T PRK04648        144 RL---------GADVPVFVRGHNAWAEGVGEQLTPISLPEAAYLLVDPGVHVPTPVLFRSQELTRDA--APAKI---ADF  209 (295)
T ss_pred             HH---------CCCCEEEEECCCEEEEECCCEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCCC--CCCCH---HHH
T ss_conf             64---------89931587477689996783635867788579998899996659997383445666--64556---777


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf             99999838721689999995999997189977999999999857980895078867
Q gi|254781018|r  243 MMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGGSAKIAGAGSI  298 (337)
Q Consensus       243 ~~~al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~~~~~g~~ak~sGAG~~  298 (337)
T Consensus       210 ~~~~~~~NdlE~~~---------~-~---~~P~I~~i~~~L~~~g~-a~MSGSGSt  251 (295)
T PRK04648        210 ASGSLLDNAFEPVL---------R-R---REPAVEAVFQALSRVGT-PRLTGSGSG  251 (295)
T ss_pred             HHCCHHHCHHHHHH---------H-H---CCHHHHHHHHHHHCCCC-CCEEEECCC
T ss_conf             62843118168999---------8-6---28899999999860598-657953521