HHsearch alignment for GI: 254781018 and conserved domain: PTZ00298
>PTZ00298 mevalonate kinase; Provisional.
Probab=100.00 E-value=0 Score=357.34 Aligned_cols=288 Identities=20% Similarity=0.227 Sum_probs=225.9
Q ss_pred CCCCCCCCCCEEEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 95435799608998581799974454407954899876672799999848982999955766675321001233334332
Q gi|254781018|r 1 MKQQTSQTPHAHSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRH 80 (337)
Q Consensus 1 ~~~~~~~~p~~~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 80 (337)
T Consensus 1 ~~~~~~~~~~~~~~a~GKvILfGEHaVVyG~pAIA~aI~~~~~~~i~~~~~~~~i~~~~~~~~-------~~-------- 65 (328)
T PTZ00298 1 MRKAVKEKTTGKHIGYGKVILFGEHFVVYGAEAIVAGIDEYTECRLELTKGVPGLQVVDQRPA-------VP-------- 65 (328)
T ss_pred CCCCHHHCCCCCCEEEEEEEEEECCEECCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCC-------CC--------
T ss_conf 973222003246247089999836831019735998834866999997579997166237855-------64--------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 11111221033477788899999875115667887699998055410389853037899999999981877540258999
Q gi|254781018|r 81 RDFIAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIA 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~ 160 (337)
T Consensus 66 -~~~~~~---~~~~~~~~~~v~~~--l~~~~~~~g~~i~i~S~iP~gaGLGSSAAv~VA~~~Al~~~~~~~ls-~~~i~~ 138 (328)
T PTZ00298 66 -GYIVEK---REEQRKAHQLVLRH--LNIDTSVDGLKMHLGGPLVPSSGIGASASDVVSLSRALSELYQLNLT-EEEVNL 138 (328)
T ss_pred -CHHHHC---CHHHHHHHHHHHHH--HCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHH
T ss_conf -123321---26677789999998--54666677538997058886567350688999999999998479999-999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCC----CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC-----H
Q ss_conf 99986411577877345787653263024027852----00147884399974971453799999999764120-----6
Q gi|254781018|r 161 ETGYIERLQHGKTGIIDSTTIVMGGIIYINPPQII----KNETLVGEWWAINTGMPESSTGECVSFVEQHFSQS-----S 231 (337)
Q Consensus 161 ~a~~~e~~~~~~~sg~D~~~~~~gg~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~-----~ 231 (337)
T Consensus 139 ~A~~~E~~~hG~pSGiD~~~s~~Gg~i~f~~~~~~~~~~~i~~~~~~~lvi~dtg~~~~T~~~V~~V~~~~~~~p~~~~~ 218 (328)
T PTZ00298 139 SAFVGEGGYHGTPSGADNTAATYGGLISYRRVNGKSVFKRIAFQQPLYLVVCSTGITASTTKVVGDVRKLKENQPTWFNR 218 (328)
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH
T ss_conf 99999998558997276999945987999854886442023678970699983698653699999999998658699999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCCEEEEEEEEC
Q ss_conf 899987654899999983872168999999599999718997799999999985798-0895078867885089999857
Q gi|254781018|r 232 IWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGG-SAKIAGAGSIRGEKAGLVLVGG 310 (337)
Q Consensus 232 ~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg~~~~~l~~~ 310 (337)
T Consensus 219 i~~~~~~iv~~a~~aL~~~d~~~lG~Lm~~nh~lL~~lgVS~p~Ld~lv~~a~~~GAlGAKLTGAG---~GGcvIaL~~~ 295 (328)
T PTZ00298 219 LLENYNACVSEAKEALQKGNLFRVGELMNANHDLCQKLTVSCRELDSIVQTCRTYGALGAKMSGTG---RGGLVVALAAS 295 (328)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCC---CCCEEEEECCC
T ss_conf 999999999999999864899999999999999897468897899999999997699655751468---87589998386
Q ss_pred CCH
Q ss_conf 997
Q gi|254781018|r 311 YNP 313 (337)
Q Consensus 311 ~~~ 313 (337)
T Consensus 296 ~~~ 298 (328)
T PTZ00298 296 EDQ 298 (328)
T ss_pred HHH
T ss_conf 666