HHsearch alignment for GI: 254781018 and conserved domain: TIGR01219
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase; InterPro: IPR016005 Phosphomevalonate kinase (2.7.4.2 from EC) catalyzes the phosphorylation of 5-phosphomevalonate into 5-diphosphomevalonate, an essential step in isoprenoid biosynthesis via the mevalonate pathway. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the higher eukaryotic form and the ERG8 type . This model represents plant and fungal forms of the ERG8 type of phosphomevalonate kinase..
Probab=99.80 E-value=5.5e-18 Score=132.08 Aligned_cols=321 Identities=19% Similarity=0.203 Sum_probs=184.9
Q ss_pred EEECCCEEEEECCCEEEC-CCEEEEEEECCCEEEEEEECCCC-----------EEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998581799974454407-95489987667279999984898-----------299995576667532100123333433
Q gi|254781018|r 12 HSIAPAKVILSGEYSSLY-GASALAVAITFYLRALLTTIEPS-----------LIRIINSQTIEYSFEACRLLGHQIDQR 79 (337)
Q Consensus 12 ~~~APGKi~L~GEh~v~~-G~~ai~~aI~~~~~v~i~~~~~~-----------~~~~~s~~~~~~~~~~~~~~~~~~~~~ 79 (337)
T Consensus 1 ~~SAPGKvL~aGGYlVLd~~y~glV~gl~Ar~yA~~~p~~~~~gPesW~~K~t~VrvkSpQf~~~EwlY~is~~~~~~~~ 80 (499)
T TIGR01219 1 VASAPGKVLLAGGYLVLDKKYEGLVVGLSARFYAVVKPLDEKVGPESWADKFTEVRVKSPQFKDAEWLYKISLKVSHLRL 80 (499)
T ss_pred CCCCCCCHHHHCCEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCEEE
T ss_conf 97687547563854466477660688640414688610122458651002123567636643465200221564461589
Q ss_pred CCCCCCCCC--CHHHHHHHHHHHHHH--HHHHC--CCCCCCCEEEEEE--------------------------------
Q ss_conf 211111221--033477788899999--87511--5667887699998--------------------------------
Q gi|254781018|r 80 HRDFIAKKI--PITSVLTHPNDLILY--IFNRH--LPHISCGISLDLH-------------------------------- 121 (337)
Q Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~--~~~~~~g~~i~i~-------------------------------- 121 (337)
T Consensus 81 ~~~~~~~s~~~~~npfiq~aia~v~~atyf~~~~~~~l~~q~l~iti~~dnayysqrnqiesaGlPltp~s~~~~~~~~~ 160 (499)
T TIGR01219 81 QSVYASVSLEKSKNPFIQLAIAAVFSATYFKKESRDKLLLQDLDITILSDNAYYSQRNQIESAGLPLTPESLTELASYAK 160 (499)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 88864123688866689999999987542165320026331622689633522444331210578567212455577752
Q ss_pred --------------CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHHHHHHCCCCC-CC
Q ss_conf --------------055410389853037899999999981877------------540258999999864115778-77
Q gi|254781018|r 122 --------------STIPIGSGFGSSSAIISALSLALSSITHQP------------FCNKEKLIAETGYIERLQHGK-TG 174 (337)
Q Consensus 122 --------------s~iP~~~GLGSSaA~~va~~~al~~~~~~~------------~~~~~~~~~~a~~~e~~~~~~-~s 174 (337)
T Consensus 161 ~~F~~~~snGans~~eV~-KTGLGSSAam~T~l~~aL~~~l~~~~~~~~dK~~K~~~S~~~viH~lAQ~aHC~AQGKvGS 239 (499)
T TIGR01219 161 LSFLAAESNGANSLEEVA-KTGLGSSAAMVTALVAALLLYLRSVDEDDVDKELKIDDSDKEVIHNLAQVAHCSAQGKVGS 239 (499)
T ss_pred EEECCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 022022225655655536-5676314899999999999986542045787343326750455554478888632785346
Q ss_pred CHHHHHHHHCCCEEEECCCCCC-----------------------------------CCCCCCCEEEEECCC-CCCCHHH
Q ss_conf 3457876532630240278520-----------------------------------014788439997497-1453799
Q gi|254781018|r 175 IIDSTTIVMGGIIYINPPQIIK-----------------------------------NETLVGEWWAINTGM-PESSTGE 218 (337)
Q Consensus 175 g~D~~~~~~gg~~~~~~~~~~~-----------------------------------~~~~~~~~~~i~~~~-~~~st~~ 218 (337)
T Consensus 240 GFDV~aA~yGS~rYrRF~P~lis~l~vPyd~~i~~~~~~~~l~~iv~~kw~Ni~~~~f~LP~~~~L~mGd~~sgGSsTp~ 319 (499)
T TIGR01219 240 GFDVAAAVYGSIRYRRFDPELISQLLVPYDVDIKSLTYSEKLAKIVKEKWDNIKVKEFSLPALLTLLMGDVKSGGSSTPK 319 (499)
T ss_pred CHHHHHHHHCCEEEEECCHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHCCCCCCCCCCCHH
T ss_conf 32377764335114446879996416860131145753789998741235653010045762447550443788867367
Q ss_pred HHHHHHHHHCCCH-----HHHHHHHH---------------------HHHHHH---HHHCCCC---------HHHHHHHH
Q ss_conf 9999997641206-----89998765---------------------489999---9983872---------16899999
Q gi|254781018|r 219 CVSFVEQHFSQSS-----IWSEFNAV---------------------TNEMME---NIQKKDA---------EKTYKSVR 260 (337)
Q Consensus 219 ~~~~~~~~~~~~~-----~~~~~~~i---------------------~~~~~~---al~~~d~---------~~l~~~~~ 260 (337)
T Consensus 320 mV~kVk~Wq~s~pees~~~~~~L~~aN~~l~~~L~~L~~L~~~H~D~~~~~~~sCsvL~~~~c~l~~~~Pineaiike~~ 399 (499)
T TIGR01219 320 MVKKVKKWQKSDPEESKEIYDDLDDANLRLEDKLSDLDKLAKDHDDVYLRVIKSCSVLESEDCVLSAEEPINEAIIKELL 399 (499)
T ss_pred HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHH
T ss_conf 88999713015836889864036665678873134777765200136788876520121235033157745789999999
Q ss_pred HHH-------HHHHHC------CCCCHHHHHHHHHHHHCCC--EEEECCCCCCCCCEEEEEEEECCCH--HHHHH-H--C
Q ss_conf 959-------999971------8997799999999985798--0895078867885089999857997--99997-4--5
Q gi|254781018|r 261 VNQ-------SLLESI------GVVPETVGKFIRCIENNGG--SAKIAGAGSIRGEKAGLVLVGGYNP--EKLSS-L--Y 320 (337)
Q Consensus 261 ~~~-------~ll~~l------~vs~~~l~~l~~~~~~~g~--~ak~sGAG~~~Gg~~~~~l~~~~~~--~~~~~-~--~ 320 (337)
T Consensus 400 E~r~a~~~IRr~~r~it~ea~vdIEP~~QT~lLD~~~~l~GVl~~gvPGAG---GfDAif~it~~~~d~~~~~~~~w~~~ 476 (499)
T TIGR01219 400 EVREAVLSIRRLLRKITKEAKVDIEPEKQTSLLDDIESLEGVLLVGVPGAG---GFDAIFVITLNDVDLREKVIKAWKSD 476 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCC---HHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_conf 999999999999998445507888873443343020025863688528985---47899988740212688998756426
Q ss_pred CCEEEEEEECCCCEEE
Q ss_conf 9869999987997092
Q gi|254781018|r 321 GYTCYKIKEDKNGTML 336 (337)
Q Consensus 321 ~~~~~~~~~~~~G~~i 336 (337)
T Consensus 477 ~V~~ldV~~a~~Gv~~ 492 (499)
T TIGR01219 477 KVLALDVSEADDGVAL 492 (499)
T ss_pred CCEEEEECCCCCCCEE
T ss_conf 8347760458774031