HHsearch results for GI: 254781018 and protein with PDBid: 3k85_A
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=0 Score=330.22 Aligned_cols=307 Identities=17% Similarity=0.125 Sum_probs=225.3
Q ss_pred CEEEECCCEEEEECCCEEE------CCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0899858179997445440------7954899876672799999848982999955766675321001233334332111
Q gi|254781018|r 10 HAHSIAPAKVILSGEYSSL------YGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDF 83 (337)
Q Consensus 10 ~~~~~APGKi~L~GEh~v~------~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (337)
-+.++|||||+|+|||+|| |||.||++|||+|+++++++++++.+.+.+....... .+...+...
T Consensus 3 ~i~~raP~RI~l~G~~tD~~~~~~~~gG~via~AId~~~~v~v~~~~~~~i~i~~~d~~~~~------~~~~~~~~~--- 73 (357)
T 3k85_A 3 LVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYCTIEETNSGRIEINAYDAQCCK------SYLSMSQLE--- 73 (357)
T ss_dssp CEEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEEEEEEECSSSEEEEEETTTTEEE------EEECCSSCC---
T ss_pred EEEEECCEEEEEECCCCCCCHHHCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEE------EEECCCCCC---
T ss_conf 99998999789870763681133448979999998681899999999996999965888516------981243123---
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 11221033477788899999875115667887699998055410389853037899999999981877540258999999
Q gi|254781018|r 84 IAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETG 163 (337)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~ 163 (337)
...+..+....+... .......+.||++.++|++|.++|||||||++||++.+++.+++.+++ ++++.++|.
T Consensus 74 ------~~~~~~~i~~~~~~~-~~~~~~~~~g~~i~i~S~iP~gsGLGSSAA~~Va~~~al~~~~~~~l~-~~~l~~~a~ 145 (357)
T 3k85_A 74 ------IDGEASLIKGVYNRI-IRDYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEWLSLPLG-DYETSRLAY 145 (357)
T ss_dssp ------CCSSSHHHHHHHHHH-HHHTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHHHTCCCC-HHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHH-HHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHH
T ss_conf ------466067899999999-997278898759999657868889884068889889998865545115-388999999
Q ss_pred HHHHCCCCCCCC-HHHHHHHHCCCEEEECCCCCCCCC------------CCCCEEEEECCCCCCCHHHHHHHHHHHH---
Q ss_conf 864115778773-457876532630240278520014------------7884399974971453799999999764---
Q gi|254781018|r 164 YIERLQHGKTGI-IDSTTIVMGGIIYINPPQIIKNET------------LVGEWWAINTGMPESSTGECVSFVEQHF--- 227 (337)
Q Consensus 164 ~~e~~~~~~~sg-~D~~~~~~gg~~~~~~~~~~~~~~------------~~~~~~~i~~~~~~~st~~~~~~~~~~~--- 227 (337)
.+|...++.+|| +||+++++||.++++..+...... +...+++++++..+.++.......++..
T Consensus 146 ~~E~~~~g~~~G~~D~~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~tg~~~~s~~~~~~~~~~~~~~~ 225 (357)
T 3k85_A 146 EIERKDLGLSGGKQDQYAAAFGGFNYMEFLQNDLVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAAIINEQKKNTSEGN 225 (357)
T ss_dssp HHHHTTTCCCCCSHHHHHHHHCSEEEEEEETTTEEEEEEECCCHHHHHHHHHTEEEECC---------------------
T ss_pred HHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87665428987765406451676215774058843771123204455554303325424753307766678887664301
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCCEE
Q ss_conf -120689998765489999998387216899999959999971--8997799999999985798-089507886788508
Q gi|254781018|r 228 -SQSSIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLESI--GVVPETVGKFIRCIENNGG-SAKIAGAGSIRGEKA 303 (337)
Q Consensus 228 -~~~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~l--~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg~~ 303 (337)
.....+..+..++.++.++++++|++.++++|+++|.++.++ +|++|+++++++.+++.|+ |+|+||||+ |+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~a~~~~d~~~lg~lm~~~~~~~~~l~~~vs~~~ld~l~~~a~~~Ga~gaKlsGAGg---GG~ 302 (357)
T 3k85_A 226 QTAIEAMHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKMAGAITNPMIQEAFDVATGAGAMAGKVSGAGG---GGF 302 (357)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC-----------CCSCTTTTSCCSEEEECCCC------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECH---HHE
T ss_conf 88998887776666777876630269999999999999877641479989999999999768996999973061---028
Q ss_pred EEEEEECCCHHHHH---HHCCCEEEEEEECCCCEEE
Q ss_conf 99998579979999---7459869999987997092
Q gi|254781018|r 304 GLVLVGGYNPEKLS---SLYGYTCYKIKEDKNGTML 336 (337)
Q Consensus 304 ~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~G~~i 336 (337)
.+++.+..+.+++. +-.+++++|++++.+|+++
T Consensus 303 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~G~~~ 338 (357)
T 3k85_A 303 IMFVVEPTRKEEVVRALNNLNGFVMPFQFIDDGAHG 338 (357)
T ss_dssp EEEECCHHHHHHHHHHHHTSSSCBCCCCBCCCCCEE
T ss_pred EEEEECHHHHHHHHHHHHHCCCEEEEEEECCCCCEE
T ss_conf 999987645999999998779849999991799518