HHsearch results for GI: 254781018 and protein with PDBid: 3lto_A
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=99.69 E-value=8.4e-14 Score=104.35 Aligned_cols=277 Identities=14% Similarity=0.100 Sum_probs=147.1
Q ss_pred CEEEECCCEEEEE---CCCE---EECCCEEEEEEECC-CEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0899858179997---4454---40795489987667-279999984898299995576667532100123333433211
Q gi|254781018|r 10 HAHSIAPAKVILS---GEYS---SLYGASALAVAITF-YLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRD 82 (337)
Q Consensus 10 ~~~~~APGKi~L~---GEh~---v~~G~~ai~~aI~~-~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 82 (337)
.++|+||-.|=|+ |-.- .+=-.+.|++.++. +|+.+++..+...... ..... +....
T Consensus 2 ~~~a~Ap~NIAliKYWGK~d~~~~lP~n~SiSlTL~~~~T~t~v~~~~~~~~~~-d~~~l--------------ng~~~- 65 (323)
T 3lto_A 2 HWFAQAPANIALIKYMGKKDENSNLPDNSSLSYTLSNLLSSVKLEKLPTKKDIW-EPLTI--------------PGAPE- 65 (323)
T ss_dssp EEEEEEEEEEEEECCTTCBCTTTCCBSSCEEEEEEEEEEEEEEEEECSSSSCEE-CCBCT--------------TSSBC-
T ss_pred CCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC-EEEEE--------------CCEEC-
T ss_conf 834177544689830475688887899971256806996689999842677642-16898--------------98353-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-HHHHHHH
Q ss_conf 111221033477788899999875115667887699998055410389853037899999999981877540-2589999
Q gi|254781018|r 83 FIAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCN-KEKLIAE 161 (337)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~-~~~~~~~ 161 (337)
.. .. .....+.......+ +.......++++.+.+++|.++|||||||..+|++.+++.+++..... ...+.++
T Consensus 66 ~~-~~---~~~~~r~~~~l~~i--~~~~~~~~~~~I~s~N~~P~aaGLaSSASa~aA~~~aa~~~~~~~~~~~~~~~~~l 139 (323)
T 3lto_A 66 FN-LS---VEAQKRFIDHLVRL--KEYFGYVGGFLIQSSNNFPHSSGLASSASSFAALTKCASIALSELTQKPLPSIDEQ 139 (323)
T ss_dssp CC-CC---SHHHHHHHHHHHHH--HHHHTCCCCEEEEEEESSCTTTTCCCHHHHHHHHHHHHHHHHHHHHTCCCCCHHHH
T ss_pred CC-CC---HHHHHHHHHHHHHH--HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 33-25---79999999999999--98679874289999568774312110567999999999999740322320028899
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCC--C--EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 99864115778773457876532630240278520014788--4--3999749714537999999997641206899987
Q gi|254781018|r 162 TGYIERLQHGKTGIIDSTTIVMGGIIYINPPQIIKNETLVG--E--WWAINTGMPESSTGECVSFVEQHFSQSSIWSEFN 237 (337)
Q Consensus 162 a~~~e~~~~~~~sg~D~~~~~~gg~~~~~~~~~~~~~~~~~--~--~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~ 237 (337)
+..++. +....+.|+|||++.....+........+ . .+++.......++.+..+.+....-....+....
T Consensus 140 s~~ar~------gSgSaarSi~GG~v~w~~~~~~~~~~~~~~~~~~i~vv~~~~k~vsS~~a~~~~~tsp~~~~~~~~~~ 213 (323)
T 3lto_A 140 AQLSRL------GSGSSCRSFYAPWALWTGDKVSAIDLPYKDLLHQVIVISSQEKEIPSRVAHKLVKTSPFYETRSERAE 213 (323)
T ss_dssp HHHHHT------TCGGGGGGGSCSEEEEETTEEEECCCSCCSCEEEEEECCCCTTCCCHHHHHHHGGGSTTTTTHHHHHH
T ss_pred HHHHHC------CCCCCCCHHHCCCEEEECCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
T ss_conf 999722------89974504428806850798753305764511159994277666772655510568976699998717
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHH----HHHHHH-C-CC--CCHHHHHHHHHHH----HCCC-EEEECCCCCCCCCEEE
Q ss_conf 6548999999838721689999995----999997-1-89--9779999999998----5798-0895078867885089
Q gi|254781018|r 238 AVTNEMMENIQKKDAEKTYKSVRVN----QSLLES-I-GV--VPETVGKFIRCIE----NNGG-SAKIAGAGSIRGEKAG 304 (337)
Q Consensus 238 ~i~~~~~~al~~~d~~~l~~~~~~~----~~ll~~-l-~v--s~~~l~~l~~~~~----~~g~-~ak~sGAG~~~Gg~~~ 304 (337)
.....++++|+++|++.+++++..+ |..... . .+ -+|+-..+++..+ +.|. +.-.+|||+ ..
T Consensus 214 ~~~~~~~~Al~~~d~~~l~~l~e~d~~~mHa~~~~s~pp~~y~~~~s~~~i~~v~~~r~~~G~~~~~T~DAGP-----nv 288 (323)
T 3lto_A 214 ANLKLLLNAFENKDWTSIYQICWHEFLDMHQLFKTCEKPFSYITDNTLHILSVIEKFWNEKGDGPVVTMDAGP-----NV 288 (323)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCSCCHHHHHHHHHHHHHHHHHSCCCEEECCSSS-----CE
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-----CE
T ss_conf 7599999999747899999999999999899987059985501826999999999999966993699867883-----77
Q ss_pred EEEEECCCHHHHHHH
Q ss_conf 999857997999974
Q gi|254781018|r 305 LVLVGGYNPEKLSSL 319 (337)
Q Consensus 305 ~~l~~~~~~~~~~~~ 319 (337)
.++...++.+.+.++
T Consensus 289 ~vl~~~~~~~~v~~~ 303 (323)
T 3lto_A 289 HLLYRSDQTDLARQF 303 (323)
T ss_dssp EEEECGGGHHHHHHH
T ss_pred EEEECCCCHHHHHHH
T ss_conf 999754548999999