HHsearch alignment for GI: 254781019 and conserved domain: COG3321
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].
Probab=97.65 E-value=0.0031 Score=39.12 Aligned_cols=172 Identities=18% Similarity=0.224 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCCHH-------------------HHHHHHHHHCCCCCCEEEEEC
Q ss_conf 99999999997279--57868----999945788754600-------------------588886320268773589841
Q gi|254781019|r 54 MAAAAALPIMQNQD--KNLID----TLFFATESSVDQSKS-------------------AAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 54 mA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~~~-------------------~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G--Ps~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG--PSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHEEECCC--CCCCCC
T ss_conf 999999999997599922256742489965656664442322212355221025422021010122043457--854222
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-----CC---------------C-CCCCCCCCCCCEEEEEECCC--
Q ss_conf 4203588899878999973999769995033201-----45---------------8-88753347830246884268--
Q gi|254781019|r 109 QACYSATCALHMACALVAKSPERKVLIVASDVAR-----YD---------------L-GSSGEPTQGCGAVAILISSQ-- 165 (396)
Q Consensus 109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~-----~~---------------~-~~~~~~t~GaGA~Allv~~~-- 165 (396)
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~ 251 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSD 251 (1061)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHH
T ss_conf 36767899999999987548720132022210358604443443035586677578755578668721468998625887
Q ss_pred -----CCCCEEEECCCCCCCC-CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf -----7630353100015678-6511275887542356601698999999999999999629882110123311454057
Q gi|254781019|r 166 -----TSILEIEDITGIYTND-CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRM 239 (396)
Q Consensus 166 -----~~~~~~~~~~~~~~~~-~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~ 239 (396)
T Consensus 252 A~~dgd~IyavI~gsavn~dG~~~gltaP~----------------~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~l 315 (1061)
T COG3321 252 AERDGDRIYAVIRGSAVNQDGRSNGLTAPN----------------LEAQADVIREALADAGIDPATVQYVEAHGTGTPL 315 (1061)
T ss_pred HHHCCCEEEEEEEEEEEECCCCCCCCCCCC----------------HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
T ss_conf 875799179999502550577656744788----------------8899999999998559990335167611477656
Q ss_pred HHHH
Q ss_conf 8888
Q gi|254781019|r 240 AEKA 243 (396)
Q Consensus 240 ~~~~ 243 (396)
T Consensus 316 GDpi 319 (1061)
T COG3321 316 GDPI 319 (1061)
T ss_pred CCHH
T ss_conf 4789