HHsearch alignment for GI: 254781019 and conserved domain: PRK06059
>PRK06059 lipid-transfer protein; Provisional.
Probab=99.44 E-value=2e-10 Score=83.87 Aligned_cols=266 Identities=15% Similarity=0.117 Sum_probs=149.4
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf 03832466559985999999999999997279--57868999945788754-6005888863202687735898414203
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACY 112 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~ 112 (396)
T Consensus 10 GvG~t~--~gr~~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~~~~~~~~~~~~a~~lGl~-g~p~~~v~~~~a 86 (399)
T PRK06059 10 GAGMHP--WGKWGRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRNGYPGFVAGATFAQKLGWN-GVPVTSSYAACA 86 (399)
T ss_pred EECCCC--CCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCCHH
T ss_conf 823466--56389798999999999999855999899468843034566777532269999975998-863112116248
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC---------CC-------------C----------------------
Q ss_conf 588899878999973999769995033201458---------88-------------7----------------------
Q gi|254781019|r 113 SATCALHMACALVAKSPERKVLIVASDVARYDL---------GS-------------S---------------------- 148 (396)
Q Consensus 113 g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~---------~~-------------~---------------------- 148 (396)
T Consensus 87 sG~~a~~~A~~~I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA 166 (399)
T PRK06059 87 SGSQALQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFA 166 (399)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999998499878999403357876544554556677114443014785088999999999999797999999
Q ss_pred ---------------------------------CCC-------CCCCCEEEEEECCCCC----------CCEEEECCCCC
Q ss_conf ---------------------------------533-------4783024688426876----------30353100015
Q gi|254781019|r 149 ---------------------------------GEP-------TQGCGAVAILISSQTS----------ILEIEDITGIY 178 (396)
Q Consensus 149 ---------------------------------~~~-------t~GaGA~Allv~~~~~----------~~~~~~~~~~~ 178 (396)
T Consensus 167 ~vavk~~~~a~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~-~~~ 245 (399)
T PRK06059 167 QVKVKNARHGLDNPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAI-STV 245 (399)
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEE-EEE
T ss_conf 9999999877109286668998878872382645261551317888850899995599998722356788399999-840
Q ss_pred CCCCCCCCCCCCCCCEEECCHHHHHHHHH-HHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH
Q ss_conf 67865112758875423566016989999-99999999999629882110123311454057888886411024544100
Q gi|254781019|r 179 TNDCMDFWRPNYRRTALVDGKYSTKIYLQ-SLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV 257 (396)
Q Consensus 179 ~~~~~df~rp~~~~~~~~dg~~~~~~y~~-~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~ 257 (396)
T Consensus 246 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~-~Ge~~ 322 (399)
T PRK06059 246 T-PQYPQHLPELPDIA-TDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCP-KGEAE 322 (399)
T ss_pred C-CCCCCCCCCCCCCC-CCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCC-CCCHH
T ss_conf 5-75443332333212-221010233155678999999999829997887277531666098999999849978-98379
Q ss_pred HHHH---------HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----CC-CCCCCCEEEEEEECC
Q ss_conf 1345---------5543334445323854323389999999971----57-436988899984079
Q gi|254781019|r 258 AEIE---------KAIGITTLYNRLIGNSYTASLYIALISLLDH----SS-ENLAGKRVGFFSYGS 309 (396)
Q Consensus 258 ~~~e---------~~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~~-~~~~G~rIll~syGs 309 (396)
T Consensus 323 ~~v~~G~~~~~G~lPvNtsGGlls-~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G 387 (399)
T PRK06059 323 ALLRSGATTLGGRIPVNPSGGLAC-FGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQG 387 (399)
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
T ss_conf 999779966799703558860211-89966157999999999997488767738986178874778