HHsearch alignment for GI: 254781019 and conserved domain: PRK06363
>PRK06363 consensus.
Probab=99.37 E-value=4.3e-10 Score=81.77 Aligned_cols=249 Identities=16% Similarity=0.149 Sum_probs=145.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC--CHHHHHHHHHHHCCCC-CCEEEEECCCHHHHHHHHHHH
Q ss_conf 985999999999999997279--57868999945788754--6005888863202687-735898414203588899878
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ--SKSAAIWLHKLLGLNS-SCRVVELKQACYSATCALHMA 121 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~--~~~~a~~v~~~Lgl~~-~~~~~Di~~aC~g~~~AL~~A 121 (396)
T Consensus 18 ~~~s~~~L~~ea~~~Al~dAgl~~~dID~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~~~vp~~~v~~~C~SG~~Ai~~A 97 (387)
T PRK06363 18 WERSFRDLIVEAGIKAIEDANVSGEDIDAMYVGNMSGGRFVGQEHIGALIADYAGLNTLPIPATRVEAACASGGLALRQA 97 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 99798999999999999980979899999999825754344613099999997399888765488866317999999999
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCCCCCC----------C-----------------------------------------
Q ss_conf 9999739997699950332014588875----------3-----------------------------------------
Q gi|254781019|r 122 CALVAKSPERKVLIVASDVARYDLGSSG----------E----------------------------------------- 150 (396)
Q Consensus 122 ~~~i~sg~~~~aLVV~sD~~~~~~~~~~----------~----------------------------------------- 150 (396)
T Consensus 98 a~~I~sG~~dvvlagG~E~ms~~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~yG~tre~~a~~A~~s~~~A~ 177 (387)
T PRK06363 98 VLAVASGYHDIVLAAGVEKMTDVGDATSALATAADREWEAFVGATFPSLYAMIAKRHMHEYGTTREQLAQVAVKNHENGA 177 (387)
T ss_pred HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99997499868999601367788765542222445352001377518999999999999979699999999998166454
Q ss_pred ------------------------C-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf ------------------------3-------4783024688426876-------3035310001567865112758875
Q gi|254781019|r 151 ------------------------P-------TQGCGAVAILISSQTS-------ILEIEDITGIYTNDCMDFWRPNYRR 192 (396)
Q Consensus 151 ------------------------~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~~~df~rp~~~~ 192 (396)
T Consensus 178 ~np~a~~~~~~t~d~~~~~~~i~~pl~~~d~s~~sDGAaAvvl~s~e~A~~~~~~pv~i~g-~~~~~~~~~~~~~~~--- 253 (387)
T PRK06363 178 KNPYAQFRNEITVDQVLNSSMVADPLRLLDCSPVSDGAAAVIVCPAEKAREYTDTPIYIKA-SAQASDTIALHDRKD--- 253 (387)
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCEEEEE-EEEEECCCCCCCCCC---
T ss_conf 2850015787547552266656665315552466888348997159999865999579999-999835544567886---
Q ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHH---------HH
Q ss_conf 423566016989999999999999996298821101233114540578888864110245441001345---------55
Q gi|254781019|r 193 TALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIE---------KA 263 (396)
Q Consensus 193 ~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e---------~~ 263 (396)
T Consensus 254 --~~--------~~~~~~~a~~~a~~~AGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~-~~ge~~~~~~~g~~~~~g~~p 322 (387)
T PRK06363 254 --IT--------TLDATVVASKKAYEMAGLTPKDIDVAEVHDCFTIAELCAIEDLGFC-KKGEAGKVTEEGKTAIGGDIP 322 (387)
T ss_pred --CC--------CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCC
T ss_conf --44--------5771699999999984999888757641110168899999981998-566157898768854599960
Q ss_pred HHHHHHHHHHCCCCCCCH---HHHHHHHHHHH-C-CCCCCCCEEEEEEECCCC
Q ss_conf 433344453238543233---89999999971-5-743698889998407983
Q gi|254781019|r 264 IGITTLYNRLIGNSYTAS---LYIALISLLDH-S-SENLAGKRVGFFSYGSGC 311 (396)
Q Consensus 264 ~~~~~~~~~~~GN~~SAS---i~l~L~slLe~-~-~~~~~G~rIll~syGsG~ 311 (396)
T Consensus 323 vN~~GG~i-a~GHP~gatG~~~~~e~~~qLrg~ag~~qv~~~~~gl~~~~GG~ 374 (387)
T PRK06363 323 VNPSGGLK-ACGHPVGATGIKQVVEIVWQLRGDAGKRQVDGAEIGMTHNVGGT 374 (387)
T ss_pred EECCHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH
T ss_conf 71786798-76982317899999999999834213118777778988768866