HHsearch alignment for GI: 254781019 and conserved domain: TIGR00747

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655 Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00  E-value=0  Score=442.79  Aligned_cols=298  Identities=21%  Similarity=0.221  Sum_probs=257.9

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf             9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT   78 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T   78 (396)
T Consensus         1 ~~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT   80 (329)
T TIGR00747         1 MKAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVAT   80 (329)
T ss_pred             CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             93578986030775135733345321068331123686100021472012689999999999985278866878679805


Q ss_pred             CCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC---CC
Q ss_conf             78875-460058888632026877358984142035888998789999739997699950332014588875334---78
Q gi|254781019|r   79 ESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPT---QG  154 (396)
Q Consensus        79 ~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t---~G  154 (396)
T Consensus        81 ~~pd~l~fPS~Ac~~~~~LGi~-~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFG  159 (329)
T TIGR00747        81 TTPDYLAFPSAACMVQAYLGIK-NIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFG  159 (329)
T ss_pred             CCCCCCCCCCHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEC
T ss_conf             7800003778589999761866-763222365676689999999998615770268899851105536746687579960


Q ss_pred             CCEEEEEECCCCCCC--EEEECC----CCCCC--------CCCCCCC---CCCCCCEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf             302468842687630--353100----01567--------8651127---588754235660169899999999999999
Q gi|254781019|r  155 CGAVAILISSQTSIL--EIEDIT----GIYTN--------DCMDFWR---PNYRRTALVDGKYSTKIYLQSLEAVWHDYQ  217 (396)
Q Consensus       155 aGA~Allv~~~~~~~--~~~~~~----~~~~~--------~~~df~r---p~~~~~~~~dg~~~~~~y~~~~~~a~~~~l  217 (396)
T Consensus       160 DGAgA~v~g~s~~~~~~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~~~l  239 (329)
T TIGR00747       160 DGAGAVVVGESEDDGGLEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVEETL  239 (329)
T ss_pred             CCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf             67226887045787763012346530564432132067776688777734466661787373258899999999999999


Q ss_pred             HHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             96298821101233114540578888864110245441001345554333444532385432338999999997157436
Q gi|254781019|r  218 KNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENL  297 (396)
Q Consensus       218 ~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~  297 (396)
T Consensus       240 ~~a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~----------Vv~T--v~khyGNTSAASiP~AL~E~~~-~G~iK  306 (329)
T TIGR00747       240 EAAGLSKEDIDWLVPHQANIRIIEALAKRLELKESK----------VVKT--VHKHYGNTSAASIPIALDELLE-TGRIK  306 (329)
T ss_pred             HHHCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCC----------EEEE--EECCCCCCHHHHHHHHHHHHHH-CCCCC
T ss_conf             971878304615555411168999999970898031----------6863--2001346304346678999874-17777


Q ss_pred             CCCEEEEEEECCCCC
Q ss_conf             988899984079830
Q gi|254781019|r  298 AGKRVGFFSYGSGCV  312 (396)
Q Consensus       298 ~G~rIll~syGsG~~  312 (396)
T Consensus       307 ~Gd~~LL~AFGGGLt  321 (329)
T TIGR00747       307 KGDLLLLVAFGGGLT  321 (329)
T ss_pred             CCCEEEEEEECHHHH
T ss_conf             244888763060356