BLAST/PSIBLAST alignment of GI: 254781019 and GI: 78486060 at iteration 1
>gi|78486060|ref|YP_391985.1| hydroxymethylglutaryl-coenzyme A synthase [Thiomicrospira crunogena XCL-2] Length = 389
>gi|78364346|gb|ABB42311.1| hydroxymethylglutaryl-CoA synthase [Thiomicrospira crunogena XCL-2] Length = 389
 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 255/386 (66%), Gaps = 1/386 (0%)

Query: 1   MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAAL 60
           M +GI+ I F T++ +L L+  A++   DV K+ +GIGQE+MS+  PDEDIVT++A AA 
Sbjct: 1   MKVGIDLIHFATSDYFLGLNTFAKEKGTDVNKYLIGIGQEQMSIAPPDEDIVTLSAKAAA 60

Query: 61  PIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHM 120
           PI++  DK  I  + FATES VDQSKSA  +LH LL L   CRVVE K ACY+ T AL M
Sbjct: 61  PILEQIDKQKITAVLFATESGVDQSKSAGAFLHGLLDLPKRCRVVEFKHACYAGTAALQM 120

Query: 121 ACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTSILEIEDITGIYTN 180
           A  +V  +P+  +L++A+D+A+YD+ SSGE TQGCGAVA+L+     IL IE  +G YT+
Sbjct: 121 ANTMVKANPKENILVIAADIAKYDVDSSGEATQGCGAVAMLVKENPRILNIEPGSGYYTD 180

Query: 181 DCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMA 240
           D MDFWRPNYR TALVDGKYSTK+YL SL+  W  + +  G  F++   FCYH PF+RM 
Sbjct: 181 DVMDFWRPNYRTTALVDGKYSTKVYLNSLKQAWEHFVEETGRHFDNIDAFCYHIPFSRMT 240

Query: 241 EKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGK 300
           EKAH  L K V  N+S    ++       YNR++GNSY+ASL+I   S LD+++++L+ K
Sbjct: 241 EKAHKTLIKKVKANVSDQTFKEQTLAGQTYNRVVGNSYSASLFIGFCSFLDNATQDLSNK 300

Query: 301 RVGFFSYGSGCVAEFFSGIVQKNYRKKSHQKRHQHIINSRIPISYQVYCDLHQDIIPSVE 360
           R GFFSYGSGCVAEFFSG++Q  Y+       HQ  I SR  +SY+ Y   +       E
Sbjct: 301 RFGFFSYGSGCVAEFFSGVIQPGYKDHLMTASHQKQIQSRQELSYKEYLTFYHQTDVDAE 360

Query: 361 GNCTIPHTTTGPFRLATIQNHKRIYE 386
            N +      G FRL  I++H RIYE
Sbjct: 361 -NISFSSYNKGLFRLKAIRDHIRIYE 385