RPSBLAST alignment for GI: 254781019 and conserved domain: TIGR00748

>gnl|CDD|129831 TIGR00748, HMG_CoA_syn_Arc, hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. Length = 345

 Score = 88.8 bits (220), Expect = 2e-18
 Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 19/339 (5%)

Query: 22  IAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79
           IA  +  D      G+  E  +V   DED  T+   AA   ++    D   I  ++  +E
Sbjct: 21  IARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80

Query: 80  SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASD 139
           S     K  A  + + +G        +L+ AC + T  +     LVA    +  L + +D
Sbjct: 81  SHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGAD 140

Query: 140 VARYDLGSSGEPTQGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGK 199
            A+   G + E T G G  A +I  + ++   E  T  YT D  DFWR          G+
Sbjct: 141 TAQGAPGDALEYTAGAGGAAYIIGEKNTVAYFEG-TYSYTTDTPDFWRREGEPYPRHGGR 199

Query: 200 YSTK-IYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVA 258
           ++ +  Y   +        +  G    DF Y  +HQP      K ++  +++    L   
Sbjct: 200 FTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARM----LGFP 251

Query: 259 EIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSG 318
           + +   G+ T     IGN+Y+ +  + L ++LD +     G R+   SYGSG  ++ FS 
Sbjct: 252 KEQVKPGLLTPR---IGNTYSGATPVGLSAVLDIAE---PGDRILAVSYGSGAGSDAFSI 305

Query: 319 IVQKNY-RKKSHQKRHQHIINSRIPISYQVYCDLHQDII 356
           +VQ     K+    +    I  +  I Y +Y    +  I
Sbjct: 306 VVQDAIEEKRDLAPKVADYIKRKKYIDYALYAKFRRKYI 344