HHsearch alignment for GI: 254781020 and conserved domain: COG0159
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism].
Probab=96.98 E-value=0.023 Score=32.28 Aligned_cols=157 Identities=14% Similarity=0.154 Sum_probs=88.8
Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 12367998999987765089857625320356652068852430799999999873997178504786688999999976
Q gi|254781020|r 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 (337)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~a 206 (337)
T Consensus 104 Npi~~~Gie~F~~~~~~~GvdGliv-pDLP~ee------------~~~~~~~~~~~gi~~I~l-vaPtt~~~rl~~i~~~ 169 (265)
T COG0159 104 NPIFNYGIEKFLRRAKEAGVDGLLV-PDLPPEE------------SDELLKAAEKHGIDPIFL-VAPTTPDERLKKIAEA 169 (265)
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEE-CCCCHHH------------HHHHHHHHHHCCCCEEEE-ECCCCCHHHHHHHHHH
T ss_conf 1887735999999999759987985-7898667------------778999999769867988-6999998999999974
Q ss_pred CCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHH
Q ss_conf 99799945888865100123102344323244310634688999998522898799729888889999999838885233
Q gi|254781020|r 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 (337)
Q Consensus 207 Gad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~i 286 (337)
T Consensus 170 a~GFiY~vs~~GvTG~~~~~---------------~~~~~~~v~~vr~~~-~~Pv~vGFGIs~~e~~~~v~~~-ADGVIV 232 (265)
T COG0159 170 ASGFIYYVSRMGVTGARNPV---------------SADVKELVKRVRKYT-DVPVLVGFGISSPEQAAQVAEA-ADGVIV 232 (265)
T ss_pred CCCCEEEEECCCCCCCCCCC---------------CHHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHH-CCEEEE
T ss_conf 79858999666666777653---------------046999999999744-8973874486999999999976-885797
Q ss_pred HHHHHHHHCCCHH-HHHHHHHHHHHHHHH
Q ss_conf 4799998414668-999999999999999
Q gi|254781020|r 287 ASPFLKPAMDSSD-AVVAAIESLRKEFIV 314 (337)
Q Consensus 287 Gr~~l~~~~~G~~-gv~~~l~~l~~el~~ 314 (337)
T Consensus 233 GSAiV~~i~~~~~~~~~~~~~~l~~~l~~ 261 (265)
T COG0159 233 GSAIVKIIEEGLDEEALEELRALVKELKA 261 (265)
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 39999999955514469999999999998