HHsearch alignment for GI: 254781020 and conserved domain: COG0167
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism].
Probab=99.95 E-value=1.9e-26 Score=174.04 Aligned_cols=273 Identities=15% Similarity=0.105 Sum_probs=175.3
Q ss_pred CCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHH-----------------------HHCC
Q ss_conf 46299898962568685012663343000256999999998099066052022-----------------------1128
Q gi|254781020|r 45 DPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRV-----------------------MFSD 101 (337)
Q Consensus 45 dlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~-----------------------~~~~ 101 (337)
T Consensus 1 ~l~~~~~Gl~f~NPl~lAa---G~~~--~~~~~~~~~~~~g~G-~i~~ktvt~~pq~Gnp~PR~~~l~~~~~~iN~mG~~ 74 (310)
T COG0167 1 DLSTEILGLKFPNPLGLAA---GFDG--KNGEELDALAALGFG-AIVTKTVTPEPQEGNPKPRLFRLPEDEGLINRMGFN 74 (310)
T ss_pred CCCEEECCEECCCCCEECC---CCCC--CCHHHHHHHHHCCCC-EEEECCCCCCCCCCCCCCEEEEECCCCCHHHHCCCC
T ss_conf 9740356466499776745---5786--577899999855785-699667777777899998178715753088754898
Q ss_pred HHHHHHHHH--HHHCCCH-HHHHCCCCCCCC-CCCCHHHHHHHHHHHC-CCEEEECCCCHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 668889999--9866401-232202752123-6799899998776508-9857625320356652068852430799999
Q gi|254781020|r 102 HNAIKSFEL--RQYAPHT-VLISNLGAVQLN-YDFGVQKAHQAVHVLG-ADGLFLHLNPLQEIIQPNGNTNFADLSSKIA 176 (337)
Q Consensus 102 ~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 176 (337)
T Consensus 75 N~G~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~ad~ielNiScPnt~g~~~l~~~~e~l~~l~~ 154 (310)
T COG0167 75 NPGADAFLEELKLAKYEGKPIGVNIGKNKGGPSEEAWADYARLLEEAGDADAIELNISCPNTPGGRALGQDPELLEKLLE 154 (310)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHH
T ss_conf 65289999998864001477676348875788578899999999750778879998538999774665439999999999
Q ss_pred HHHHHCCCCEEEEECCCCCCH-HHHHHHHHCCCCEEEECCCCC-CCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHH-
Q ss_conf 999873997178504786688-999999976997999458888-65100123102344323244310634688999998-
Q gi|254781020|r 177 LLSSAMDVPLLLKEVGCGLSS-MDIELGLKSGIRYFDIAGRGG-TSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMAR- 253 (337)
Q Consensus 177 ~l~~~~~~pii~k~v~~~~~~-~~~~~a~~aGad~i~v~~~gG-~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~- 253 (337)
T Consensus 155 ~vk~~~~~Pv~vKl~P~~~di~~iA~~~~~~g~Dgl~~~NT~~~~~~i~~~~~~~~~~~~~GGLSG~~ikp~-al~~v~~ 233 (310)
T COG0167 155 AVKAATKVPVFVKLAPNITDIDEIAKAAEEAGADGLIAINTTKSGMKIDLETKKPVLANETGGLSGPPLKPI-ALRVVAE 233 (310)
T ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHH
T ss_conf 998635686599938888999999999997498589997003665530123455566767777575100278-9999999
Q ss_pred ---HHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf ---52289879972988888999999983888523347999984146689999999999999999998089857896149
Q gi|254781020|r 254 ---PYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLN 330 (337)
Q Consensus 254 ---~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~ 330 (337)
T Consensus 234 l~~~~~~~ipIIGvGGI~s~~DA~E~i~aGA~~vQv~Tal~~---~Gp----~i~~~I~~~l~~~l~~~g~~si~d~~G~ 306 (310)
T COG0167 234 LYKRLGGDIPIIGVGGIETGEDALEFILAGASAVQVGTALIY---KGP----GIVKEIIKGLARWLEEKGFESIQDIIGS 306 (310)
T ss_pred HHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHEEEEEEEE---ECC----HHHHHHHHHHHHHHHHCCCCCHHHHHCH
T ss_conf 998428997489846869699999999829756404112102---085----0999999999999998199879998453
Q ss_pred C
Q ss_conf 6
Q gi|254781020|r 331 T 331 (337)
Q Consensus 331 ~ 331 (337)
T Consensus 307 ~ 307 (310)
T COG0167 307 A 307 (310)
T ss_pred H
T ss_conf 3