HHsearch alignment for GI: 254781020 and conserved domain: KOG0399

>KOG0399 consensus.
Probab=99.86  E-value=1.3e-21  Score=145.65  Aligned_cols=279  Identities=18%  Similarity=0.160  Sum_probs=173.5

Q ss_pred             CCHHHCCCEEEECCEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHHHHCCH----HHHHH--HHHHH
Q ss_conf             9810174629989896256868501266334300025699999999809906605202211286----68889--99998
Q gi|254781020|r   39 ISFDEVDPSVEFLGKKLSFPLLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMFSDH----NAIKS--FELRQ  112 (337)
Q Consensus        39 ~~~~~vdlst~i~G~~l~~Pv~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~~~~~~----~~~~~--~~~~~  112 (337)
T Consensus       942 IPl~~VEPaseIv~R-----FcTGaMS~GsIS~EtH--~tlAIAMNRlGgKSNtGEGGEdp~R~~~l~d~~d~~rSAIKQ 1014 (2142)
T KOG0399         942 IPLEEVEPASEIVKR-----FCTGAMSYGSISMETH--TTLAIAMNRLGGKSNTGEGGEDPERSKPLADGVDTMRSAIKQ 1014 (2142)
T ss_pred             CCHHHCCCHHHHHHH-----HHCCCCCCCCCCHHHH--HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH
T ss_conf             743424837999999-----8325566540006567--899999986058677888887765524455643178999999


Q ss_pred             HCCCHH----------HHHCCCCCCCC---C-----CCCH-HHHHHHHH-HHCCCEEEECCCCHHHHHHHCCCCCHHHHH
Q ss_conf             664012----------32202752123---6-----7998-99998776-508985762532035665206885243079
Q gi|254781020|r  113 YAPHTV----------LISNLGAVQLN---Y-----DFGV-QKAHQAVH-VLGADGLFLHLNPLQEIIQPNGNTNFADLS  172 (337)
Q Consensus       113 ~~~~~~----------~~~~~~~~~~~---~-----~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (337)
T Consensus      1015 VASgRFGVTs~yL~nADeLqIKmAQGAKPGEGGeLPghKVs~dIA~tR~St~gVgLI---SPPPH-----HDIYSIEDLa 1086 (2142)
T KOG0399        1015 VASGRFGVTSYYLSNADELQIKMAQGAKPGEGGELPGHKVSADIAKTRHSTAGVGLI---SPPPH-----HDIYSIEDLA 1086 (2142)
T ss_pred             HHCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC---CCCCC-----CCCCCHHHHH
T ss_conf             861346665111047156654775179999788787614668999863688998757---89986-----6623488999


Q ss_pred             HHHHHHHHHCCC-CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC-HHHHCCCCCCCCHHHHHCCCCHHHHHH
Q ss_conf             999999987399-717850478668899999997699799945888865100-123102344323244310634688999
Q gi|254781020|r  173 SKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSR-IESHRDLESDIGIVFQDWGIPTPLSLE  250 (337)
Q Consensus       173 ~~i~~l~~~~~~-pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~-~~~~r~~~~~~~~~~~~~gi~~~~al~  250 (337)
T Consensus      1087 QLIyDLk~aNP~ArVSVKLVSEaGVGiVASGVaK~~ADhI~vSGhDGGTGAS~wt~IK~-----AGlPWELGlAEThQtL 1161 (2142)
T KOG0399        1087 QLIYDLKCANPRARVSVKLVSEAGVGIVASGVAKGNADHILVSGHDGGTGASRWTGIKH-----AGLPWELGLAETHQTL 1161 (2142)
T ss_pred             HHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCC-----CCCCHHHCCHHHHHHH
T ss_conf             99988650698760379997405612665110136676699814678867665412334-----7987310404665677


Q ss_pred             HHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH----------------------------CCCHHHHH
Q ss_conf             99852289879972988888999999983888523347999984----------------------------14668999
Q gi|254781020|r  251 MARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA----------------------------MDSSDAVV  302 (337)
Q Consensus       251 ~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~----------------------------~~G~~gv~  302 (337)
T Consensus      1162 v~NdLR~rvVlqtDGqlrtG~DV~iAallGAeefgf~T~plIalGCiMmRkCH~NtCpVGiAtQdp~LRakF~G~PehvV 1241 (2142)
T KOG0399        1162 VLNDLRGRVVLQTDGQLRTGRDVAIAALLGAEEFGFSTAPLIALGCIMMRKCHLNTCPVGIATQDPELRAKFPGQPEHVV 1241 (2142)
T ss_pred             HHCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHH
T ss_conf             64261302799836850233689999983730315440179987669998860578874111389888965799927788


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCC
Q ss_conf             99999999999999980898578961496000569
Q gi|254781020|r  303 AAIESLRKEFIVSMFLLGTKRVQELYLNTALIRHQ  337 (337)
Q Consensus       303 ~~l~~l~~el~~~m~~~G~~~i~el~~~~~~i~~~  337 (337)
T Consensus      1242 Nff~yvaEEvR~imakLGfrtldemvGrtdlLk~~ 1276 (2142)
T KOG0399        1242 NFFFYVAEEVRGIMAKLGFRTLDEMVGRTDLLKAR 1276 (2142)
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCC
T ss_conf             99999999999999883810588873615442234