HHsearch alignment for GI: 254781020 and conserved domain: KOG2333

Probab=96.12  E-value=0.086  Score=28.93  Aligned_cols=202  Identities=15%  Similarity=0.105  Sum_probs=110.2

Q ss_pred             EEEECHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCHHHH--CCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHH
Q ss_conf             68501266334300025699999999809906605202211--2866888999998664012322027521236799899
Q gi|254781020|r   59 LLISSMTGGNNKMIERINRNLAIAAEKTKVAMAVGSQRVMF--SDHNAIKSFELRQYAPHTVLISNLGAVQLNYDFGVQK  136 (337)
Q Consensus        59 v~iapmsgg~~~~~~~~~~~lA~aa~~~g~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (337)
T Consensus       267 ~~LaPLT-------TvGNLPFRRlCk~lGADvTcgEMA~~tpLlqG~~sEWALlkRH~sEd-----iFGVQlag~~pd-t  333 (614)
T KOG2333         267 KYLAPLT-------TVGNLPFRRLCKKLGADVTCGEMAMATPLLQGTASEWALLKRHQSED-----IFGVQLAGSKPD-T  333 (614)
T ss_pred             EEECCCC-------CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC-----CEEEEECCCCHH-H
T ss_conf             5432412-------35785089999985886415678887787536531245664057665-----323674268868-8


Q ss_pred             HHH----HHHHHCCCEEEECCCCHHHHHHHCCCCC--HH---HHHHHHHHHHHHCCC-CEEEEE-CCCCC----CHHHHH
Q ss_conf             998----7765089857625320356652068852--43---079999999987399-717850-47866----889999
Q gi|254781020|r  137 AHQ----AVHVLGADGLFLHLNPLQEIIQPNGNTN--FA---DLSSKIALLSSAMDV-PLLLKE-VGCGL----SSMDIE  201 (337)
Q Consensus       137 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~i~~l~~~~~~-pii~k~-v~~~~----~~~~~~  201 (337)
T Consensus       334 ~~kaaq~i~e~~~VDFIDlN~GCPIDlvy~qG~GsALl~rp~rl~~~l~~m~~vs~~iPiTVKiRTG~keg~~~a~~Li~  413 (614)
T KOG2333         334 AAKAAQVIAETCDVDFIDLNMGCPIDLVYRQGGGSALLNRPARLIRILRAMNAVSGDIPITVKIRTGTKEGHPVAHELIP  413 (614)
T ss_pred             HHHHHHHHHHHCCEEEEECCCCCCHHEEECCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf             99999999861660046326899711022067750542381899999999987605787489984044367613889999


Q ss_pred             HHH-HCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHH-CCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf             999-769979994588886510012310234432324431063468899999852-289879972988888999999983
Q gi|254781020|r  202 LGL-KSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPY-CNEAQFIASGGLRNGVDILKSIIL  279 (337)
Q Consensus       202 ~a~-~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~-~~~v~IiadGGIr~g~Dv~kAlal  279 (337)
T Consensus       414 ~i~newg~savTlHGRSRqQ-------RYTK~------AnW-----dYi~e~a~~ak~~l~liGNGDi~S~eDw~~~~~~  475 (614)
T KOG2333         414 RIVNEWGASAVTLHGRSRQQ-------RYTKS------ANW-----DYIEECADKAKSALPLIGNGDILSWEDWYERLNQ  475 (614)
T ss_pred             HHHHCCCCCEEEECCCHHHH-------HHHCC------CCH-----HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC
T ss_conf             98642475337752720655-------31023------682-----7899999744567526765750648999887535


Q ss_pred             C--CCEEHHHHHHH
Q ss_conf             8--88523347999
Q gi|254781020|r  280 G--ASLGGLASPFL  291 (337)
Q Consensus       280 G--AdaV~iGr~~l  291 (337)
T Consensus       476 ~p~v~svMIaRGAL  489 (614)
T KOG2333         476 NPNVDSVMIARGAL  489 (614)
T ss_pred             CCCCCEEEEECCCC
T ss_conf             99754478614530