HHsearch alignment for GI: 254781020 and conserved domain: KOG2550
>KOG2550 consensus.
Probab=99.90 E-value=3.5e-23 Score=154.83 Aligned_cols=151 Identities=17% Similarity=0.120 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHH
Q ss_conf 07999999998739971785047866889999999769979994588886510012310234432324431063468899
Q gi|254781020|r 170 DLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSL 249 (337)
Q Consensus 170 ~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al 249 (337)
T Consensus 278 ~qiemik~iK~~yP~l~Vi--aGNVVT~~qa~nLI~aGaDgLrVGMGsG----SiCiTq--------evma~GrpQ~TAV 343 (503)
T KOG2550 278 YQLEMIKYIKETYPDLQII--AGNVVTKEQAANLIAAGADGLRVGMGSG----SICITQ--------KVMACGRPQGTAV 343 (503)
T ss_pred HHHHHHHHHHHHCCCCEEE--CCCEEEHHHHHHHHHCCCCEEEECCCCC----CEEEEC--------EEEECCCCCCCCH
T ss_conf 5799999998668886343--1655338889999873676057525567----505453--------0123267762003
Q ss_pred HHHHHH--CCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHH-------------------------HC-------
Q ss_conf 999852--28987997298888899999998388852334799998-------------------------41-------
Q gi|254781020|r 250 EMARPY--CNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP-------------------------AM------- 295 (337)
Q Consensus 250 ~~~~~~--~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~-------------------------~~------- 295 (337)
T Consensus 344 y~va~~A~q~gvpviADGGi~~~Ghi~KAl~lGAstVMmG~lLAgtTEapGeyf~~~g~r~KkyrGMGSl~AM~~~s~~r 423 (503)
T KOG2550 344 YKVAEFANQFGVPCIADGGIQNVGHVVKALGLGASTVMMGGLLAGTTEAPGEYFFRDGVRLKKYRGMGSLDAMESSSQKR 423 (503)
T ss_pred HHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCCHHHHCCCHHCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHC
T ss_conf 26999997649965506875873177888753850631041101023588614742473432011765588775120110
Q ss_pred -----------CCH-------HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
Q ss_conf -----------466-------899999999999999999980898578961496000
Q gi|254781020|r 296 -----------DSS-------DAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTALI 334 (337)
Q Consensus 296 -----------~G~-------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~i 334 (337)
T Consensus 424 Y~~e~dkvkiAQGVsg~v~dKGsv~kfipyl~~giqh~cqdiGa~sL~~l~~~~~~~ 480 (503)
T KOG2550 424 YFSEVDKVKIAQGVSGSVQDKGSVQKFIPYLLAGIQHSCQDIGARSLKELREMMYSG 480 (503)
T ss_pred CCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 036654476415827986347525553789998887653365077799999875456