HHsearch alignment for GI: 254781020 and conserved domain: KOG4201
>KOG4201 consensus.
Probab=94.68 E-value=0.2 Score=26.71 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=66.3
Q ss_pred HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 99987399717850478668899999997699799945888865100123102344323244310634688999998522
Q gi|254781020|r 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 (337)
Q Consensus 177 ~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~ 256 (337)
T Consensus 180 k~~K~L~me~LV----EVn~~eEm~raleiGakvvGvNNRnL~sF------------------eVDlstTskL~E~--i~ 235 (289)
T KOG4201 180 KISKDLGMEPLV----EVNDEEEMQRALEIGAKVVGVNNRNLHSF------------------EVDLSTTSKLLEG--IP 235 (289)
T ss_pred HHHHHCCCCCEE----EECCHHHHHHHHHHCCEEEEECCCCCCEE------------------EECHHHHHHHHHH--CC
T ss_conf 998871875003----30659999899973757874347764136------------------6510257889850--86
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH
Q ss_conf 89879972988888999999983888523347999984
Q gi|254781020|r 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPA 294 (337)
Q Consensus 257 ~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~ 294 (337)
T Consensus 236 kDvilva~SGi~tpdDia~~q~~GV~avLVGEslmk~s 273 (289)
T KOG4201 236 KDVILVALSGIFTPDDIAKYQKAGVKAVLVGESLMKQS 273 (289)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCEEEEECHHHHHCC
T ss_conf 32698741578887889999874861898527777245