HHsearch alignment for GI: 254781020 and conserved domain: PRK05848

Probab=95.56  E-value=0.15  Score=27.52  Aligned_cols=95  Identities=14%  Similarity=-0.019  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHCCCC-EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHH
Q ss_conf             30799999999873997-17850478668899999997699799945888865100123102344323244310634688
Q gi|254781020|r  169 ADLSSKIALLSSAMDVP-LLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPL  247 (337)
Q Consensus       169 ~~~~~~i~~l~~~~~~p-ii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~  247 (337)
T Consensus       165 g~~~~ai~~~r~~~~~~~kIeV---Ev~~l~ea~~a~~~gaDiI~LDn~~~------e~~------------------k~  217 (272)
T PRK05848        165 KDLKSFIQHARKNIPFTAKIEI---ECESLEEAKEAMNAGADIVMCDNMSV------EET------------------KE  217 (272)
T ss_pred             CCHHHHHHHHHHHCCCCCEEEE---ECCCHHHHHHHHHCCCCEEEECCCCH------HHH------------------HH
T ss_conf             6899999999985899846999---74999999999845999899589999------999------------------99


Q ss_pred             HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHH
Q ss_conf             99999852289879972988888999999983888523347999
Q gi|254781020|r  248 SLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL  291 (337)
Q Consensus       248 al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l  291 (337)
T Consensus       218 ~v~~~~~~~~~v~ieaSGGI~-~~ni~~yA~~GvD~Is~g~lth  260 (272)
T PRK05848        218 IVAYRNANYPHVLLEASGNIS-LETINAYAKSGVDAISSGSLIH  260 (272)
T ss_pred             HHHHHHCCCCCEEEEEECCCC-HHHHHHHHHCCCCEEECCHHHC
T ss_conf             999874648877999979998-9999999965999998797767