HHsearch alignment for GI: 254781020 and conserved domain: PRK06559

Probab=93.57  E-value=0.46  Score=24.63  Aligned_cols=90  Identities=16%  Similarity=0.060  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHCCC-CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHH
Q ss_conf             079999999987399-7178504786688999999976997999458888651001231023443232443106346889
Q gi|254781020|r  170 DLSSKIALLSSAMDV-PLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLS  248 (337)
Q Consensus       170 ~~~~~i~~l~~~~~~-pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~a  248 (337)
T Consensus       182 ~i~~av~~~r~~~~~~~kIeVEv---~~l~q~~~a~~~g~DiIlLDNms~----------------------------~~  230 (290)
T PRK06559        182 SVQKAIAQARAYAPFVKMVEVEV---ESLAAAEEAAAAGVDIIMLDNMSL----------------------------EQ  230 (290)
T ss_pred             CHHHHHHHHHHHCCCCCEEEEEE---CCHHHHHHHHHCCCCEEEECCCCH----------------------------HH
T ss_conf             79999999998589876699985---689999999866999999879899----------------------------99


Q ss_pred             HHHH-HHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHH
Q ss_conf             9999-852289879972988888999999983888523347999
Q gi|254781020|r  249 LEMA-RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL  291 (337)
Q Consensus       249 l~~~-~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l  291 (337)
T Consensus       231 i~~av~~i~~~~~lEaSGgI-~~~ni~~yA~tGVD~IS~g~Lth  273 (290)
T PRK06559        231 IEQAITLIAGRSRIECSGNI-DMTTISRFRGLAIDYVSSGSLTH  273 (290)
T ss_pred             HHHHHHHHCCCEEEEEECCC-CHHHHHHHHHCCCCEEECCHHCC
T ss_conf             99999985796799997899-89999999973999998882206