HHsearch alignment for GI: 254781020 and conserved domain: PRK11750
>PRK11750 gltB glutamate synthase subunit alpha; Provisional.
Probab=97.53 E-value=0.00082 Score=40.82 Aligned_cols=115 Identities=14% Similarity=0.189 Sum_probs=80.6
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHH------HHHCCCCEEEE-CCCCCCH
Q ss_conf 9999999769979994588886510012310234432324431063468899999------85228987997-2988888
Q gi|254781020|r 198 MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMA------RPYCNEAQFIA-SGGLRNG 270 (337)
Q Consensus 198 ~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~------~~~~~~v~Iia-dGGIr~g 270 (337)
T Consensus 600 ~eA~~AV~~G~~ilILSDr~~------------~~------~~~~IP~LLAv~AVHh~Lir~glR~~~slVveSGe~rev 661 (1483)
T PRK11750 600 DEAEQAVRDGTVLLVLSDRNI------------AK------GRLPIPAAMAVGAVQHRLVDKGLRCDANIIVETASARDP 661 (1483)
T ss_pred HHHHHHHHCCCEEEEEECCCC------------CC------CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH
T ss_conf 999999986984999717889------------98------754510999999999999974987611279851325456
Q ss_pred HHHHHHHHHCCCEEHHHHHHHH-H-----H------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
Q ss_conf 9999999838885233479999-8-----4------146689999999999999999998089857896149600
Q gi|254781020|r 271 VDILKSIILGASLGGLASPFLK-P-----A------MDSSDAVVAAIESLRKEFIVSMFLLGTKRVQELYLNTAL 333 (337)
Q Consensus 271 ~Dv~kAlalGAdaV~iGr~~l~-~-----~------~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~ 333 (337)
T Consensus 662 HhfA~LiGyGA~AVn---PYLa~eti~~l~~~g~~~~~~~ea~~nY~kAl~kGLLKIMSKMGIStl~SY~GAqiF 733 (1483)
T PRK11750 662 HHFAVLLGFGATAVY---PYLAYETLGDLVDTGELLGDYRQVMLNYRKGINKGLYKIMSKMGISTIASYRGSQLF 733 (1483)
T ss_pred HHHHHHHHCCHHHCC---HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE
T ss_conf 685887526674507---688999999999758889999999999999999879999876271120235762320