HHsearch alignment for GI: 254781020 and conserved domain: PRK13111
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional.
Probab=96.29 E-value=0.07 Score=29.45 Aligned_cols=158 Identities=15% Similarity=0.160 Sum_probs=86.7
Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 12367998999987765089857625320356652068852430799999999873997178504786688999999976
Q gi|254781020|r 127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS 206 (337)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~a 206 (337)
T Consensus 95 N~i~~~G~e~F~~~~~~~GvdGvIip-DLP~eE------------~~~~~~~~~~~gi~~I~l-vaPtt~~~Ri~~i~~~ 160 (256)
T PRK13111 95 NPIFQYGVEAFAADAAEAGVDGLIIP-DLPPEE------------AEEFRAAAKKHGIDLIFL-VAPTTTDERLKKIASH 160 (256)
T ss_pred CHHHHHCHHHHHHHHHHCCCCEEEEC-CCCHHH------------HHHHHHHHHHCCCEEEEE-ECCCCCHHHHHHHHHH
T ss_conf 08987099999999997599779816-999788------------899999999759808999-6999988999999962
Q ss_pred CCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHH
Q ss_conf 99799945888865100123102344323244310634688999998522898799729888889999999838885233
Q gi|254781020|r 207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL 286 (337)
Q Consensus 207 Gad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~i 286 (337)
T Consensus 161 s~gfiY~vs~~GvTG~~~~-----~----------~~~~~~~i~~ik~~-t~~Pi~vGFGIs~~e~v~~-~~~~aDGvIV 223 (256)
T PRK13111 161 ASGFVYYVSRAGVTGARSA-----D----------AADVADLLARLKAH-TDLPVAVGFGISTPEQAAA-IAEGADGVIV 223 (256)
T ss_pred CCCEEEEEECCCCCCCCCC-----C----------HHHHHHHHHHHHHC-CCCCEEEECCCCCHHHHHH-HHCCCCEEEE
T ss_conf 6985999856776788766-----6----------28899999999870-6897588528899999999-9745999998
Q ss_pred HHHHHHHHCCC-HHHHHHHHHHHHHHHHHH
Q ss_conf 47999984146-689999999999999999
Q gi|254781020|r 287 ASPFLKPAMDS-SDAVVAAIESLRKEFIVS 315 (337)
Q Consensus 287 Gr~~l~~~~~G-~~gv~~~l~~l~~el~~~ 315 (337)
T Consensus 224 GSaiv~~i~~~~~~~~~~~v~~f~~~lk~~ 253 (256)
T PRK13111 224 GSALVKIIEAADPEEALAALAEFVKELKAA 253 (256)
T ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 689999998439777899999999999998