HHsearch alignment for GI: 254781020 and conserved domain: PRK13111

>PRK13111 trpA tryptophan synthase subunit alpha; Provisional.
Probab=96.29  E-value=0.07  Score=29.45  Aligned_cols=158  Identities=15%  Similarity=0.160  Sum_probs=86.7

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf             12367998999987765089857625320356652068852430799999999873997178504786688999999976
Q gi|254781020|r  127 QLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKS  206 (337)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~a  206 (337)
T Consensus        95 N~i~~~G~e~F~~~~~~~GvdGvIip-DLP~eE------------~~~~~~~~~~~gi~~I~l-vaPtt~~~Ri~~i~~~  160 (256)
T PRK13111         95 NPIFQYGVEAFAADAAEAGVDGLIIP-DLPPEE------------AEEFRAAAKKHGIDLIFL-VAPTTTDERLKKIASH  160 (256)
T ss_pred             CHHHHHCHHHHHHHHHHCCCCEEEEC-CCCHHH------------HHHHHHHHHHCCCEEEEE-ECCCCCHHHHHHHHHH
T ss_conf             08987099999999997599779816-999788------------899999999759808999-6999988999999962


Q ss_pred             CCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHH
Q ss_conf             99799945888865100123102344323244310634688999998522898799729888889999999838885233
Q gi|254781020|r  207 GIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGL  286 (337)
Q Consensus       207 Gad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~i  286 (337)
T Consensus       161 s~gfiY~vs~~GvTG~~~~-----~----------~~~~~~~i~~ik~~-t~~Pi~vGFGIs~~e~v~~-~~~~aDGvIV  223 (256)
T PRK13111        161 ASGFVYYVSRAGVTGARSA-----D----------AADVADLLARLKAH-TDLPVAVGFGISTPEQAAA-IAEGADGVIV  223 (256)
T ss_pred             CCCEEEEEECCCCCCCCCC-----C----------HHHHHHHHHHHHHC-CCCCEEEECCCCCHHHHHH-HHCCCCEEEE
T ss_conf             6985999856776788766-----6----------28899999999870-6897588528899999999-9745999998


Q ss_pred             HHHHHHHHCCC-HHHHHHHHHHHHHHHHHH
Q ss_conf             47999984146-689999999999999999
Q gi|254781020|r  287 ASPFLKPAMDS-SDAVVAAIESLRKEFIVS  315 (337)
Q Consensus       287 Gr~~l~~~~~G-~~gv~~~l~~l~~el~~~  315 (337)
T Consensus       224 GSaiv~~i~~~~~~~~~~~v~~f~~~lk~~  253 (256)
T PRK13111        224 GSALVKIIEAADPEEALAALAEFVKELKAA  253 (256)
T ss_pred             CHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             689999998439777899999999999998